RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ALAS1P13196 640 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 SLC16A2P36021 539 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 LRRC41Q15345 812 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 LENG1Q96BZ8 264 aaPredicted RBP18.73■□□□□ 0.59
CDK4-215ENST00000553237 ZKSCAN3Q9BRR0 538 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 RNF41Q9H4P4 317 aaPredicted RBP18.73■□□□□ 0.59
CDK4-215ENST00000553237 GPCPD1Q9NPB8 672 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 XPNPEP3Q9NQH7 507 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 RNF146Q9NTX7 359 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 NEDD4P46934 1319 aa18.73■□□□□ 0.59
CDK4-215ENST00000553237 FRMPD2Q68DX3 1309 aaPredicted RBP18.73■□□□□ 0.59
CDK4-215ENST00000553237 PGK1P00558 417 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
CDK4-215ENST00000553237 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
CDK4-215ENST00000553237 CNTN2Q02246 1040 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 TTC22Q5TAA0 569 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK4-215ENST00000553237 MSL3Q8N5Y2 521 aaKnown RBP18.72■□□□□ 0.59
CDK4-215ENST00000553237 ESR2Q92731 530 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 FERMT2Q96AC1 680 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 TRERF1Q96PN7 1200 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 GDF15Q99988 308 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 ACAD9Q9H845 621 aa18.72■□□□□ 0.59
CDK4-215ENST00000553237 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
CDK4-215ENST00000553237 PLXNA1Q9UIW2 1896 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 SMCHD1A6NHR9 2005 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 AKR1A1P14550 325 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 ADCYAP1R1P41586 468 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 MAGEA10P43363 369 aaPredicted RBP18.71■□□□□ 0.59
CDK4-215ENST00000553237 MAMDC4Q6UXC1 1216 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 FGD4Q96M96 766 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 TTC14Q96N46 770 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 DSCC1Q9BVC3 393 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 IL25Q9H293 177 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.71■□□□□ 0.59
CDK4-215ENST00000553237 SYNGAP1Q96PV0 1343 aa18.71■□□□□ 0.59
CDK4-215ENST00000553237 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 RTP1P59025 263 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 TKFCQ3LXA3 575 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 SYDE2Q5VT97 1194 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 SLC39A5Q6ZMH5 540 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 ZNF467Q7Z7K2 595 aaPredicted RBP18.7■□□□□ 0.58
CDK4-215ENST00000553237 A1CFQ9NQ94 594 aaKnown RBP18.7■□□□□ 0.58
CDK4-215ENST00000553237 FAM184BQ9ULE4 1060 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 CCPG1Q9ULG6 757 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
CDK4-215ENST00000553237 B4E1Z4 1266 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 KDM4AO75164 1064 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 PDHBP11177 359 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 ACVR2BQ13705 512 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
CDK4-215ENST00000553237 MUM1L1Q5H9M0 696 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 CTNNA3Q9UI47 895 aa18.69■□□□□ 0.58
CDK4-215ENST00000553237 RANBP2P49792 3224 aaKnown RBP18.69■□□□□ 0.58
CDK4-215ENST00000553237 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
CDK4-215ENST00000553237 BMP8BP34820 402 aa18.68■□□□□ 0.58
CDK4-215ENST00000553237 MDM2Q00987 491 aaPredicted RBP18.68■□□□□ 0.58
CDK4-215ENST00000553237 ARMCX2Q7L311 632 aa18.68■□□□□ 0.58
CDK4-215ENST00000553237 RNF180Q86T96 592 aa18.68■□□□□ 0.58
CDK4-215ENST00000553237 CCDC144CPQ8IYA2 1237 aa18.68■□□□□ 0.58
CDK4-215ENST00000553237 FAM133AQ8N9E0 248 aa18.68■□□□□ 0.58
CDK4-215ENST00000553237 RANBP17Q9H2T7 1088 aaKnown RBP18.68■□□□□ 0.58
CDK4-215ENST00000553237 ICAM1P05362 532 aa18.67■□□□□ 0.58
CDK4-215ENST00000553237 ZNF543Q08ER8 600 aa18.67■□□□□ 0.58
CDK4-215ENST00000553237 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
CDK4-215ENST00000553237 DGKHQ86XP1 1220 aa18.67■□□□□ 0.58
CDK4-215ENST00000553237 ABHD16BQ9H3Z7 469 aa18.67■□□□□ 0.58
CDK4-215ENST00000553237 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
CDK4-215ENST00000553237 DDX49Q9Y6V7 483 aaKnown RBP18.67■□□□□ 0.58
CDK4-215ENST00000553237 A0A1W2PPC1 479 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 IRX5P78411 483 aaPredicted RBP18.66■□□□□ 0.58
CDK4-215ENST00000553237 CCDC144BQ3MJ40 725 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 TRIM60Q495X7 471 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 IQCA1Q86XH1 822 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 PURBQ96QR8 312 aaKnown RBP18.66■□□□□ 0.58
CDK4-215ENST00000553237 UBE2OQ9C0C9 1292 aaKnown RBP18.66■□□□□ 0.58
CDK4-215ENST00000553237 CYP39A1Q9NYL5 469 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 ZSWIM5Q9P217 1185 aa18.66■□□□□ 0.58
CDK4-215ENST00000553237 ADCY6O43306 1168 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 SNHG28P0DPA3 235 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 CHMLP26374 656 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 ZSCAN10Q96SZ4 725 aaPredicted RBP18.65■□□□□ 0.58
CDK4-215ENST00000553237 UBA5Q9GZZ9 404 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 CPVLQ9H3G5 476 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
CDK4-215ENST00000553237 PRKAG2Q9UGJ0 569 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 SYNRGQ9UMZ2 1314 aa18.65■□□□□ 0.58
CDK4-215ENST00000553237 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 SOX1O00570 391 aaPredicted RBP18.64■□□□□ 0.57
CDK4-215ENST00000553237 DUSP11O75319 330 aaKnown RBP18.64■□□□□ 0.57
CDK4-215ENST00000553237 BAATQ14032 418 aaPredicted RBP18.64■□□□□ 0.57
CDK4-215ENST00000553237 SNX17Q15036 470 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 CCDC178Q5BJE1 867 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 PNMA1Q8ND90 353 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 KLHDC9Q8NEP7 349 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 RUFY2Q8WXA3 655 aa18.64■□□□□ 0.57
CDK4-215ENST00000553237 LBHD1Q9BQE6 289 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms