RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 FRMPD3Q5JV73 1810 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 DNAJC25-GNG10A0A024R161 153 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 SEC23AQ15436 765 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 LHX8Q68G74 356 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 KIAA1211Q6ZU35 1233 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 CHST13Q8NET6 341 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 DIS3LQ8TF46 1054 aaKnown RBP22.04■■□□□ 1.12
HDAC4-217ENST00000553145 UBAC1Q9BSL1 405 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 OGDHLQ9ULD0 1010 aa22.04■■□□□ 1.12
HDAC4-217ENST00000553145 MNX1P50219 401 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-217ENST00000553145 TRDNQ13061 729 aa22.03■■□□□ 1.12
HDAC4-217ENST00000553145 ANO2Q9NQ90 1003 aa22.03■■□□□ 1.12
HDAC4-217ENST00000553145 RNF146Q9NTX7 359 aa22.03■■□□□ 1.12
HDAC4-217ENST00000553145 FBXO40Q9UH90 709 aa22.03■■□□□ 1.12
HDAC4-217ENST00000553145 DIS3Q9Y2L1 958 aaKnown RBP22.03■■□□□ 1.12
HDAC4-217ENST00000553145 PDE4DIPQ5VU43 2346 aa22.03■■□□□ 1.12
HDAC4-217ENST00000553145 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
HDAC4-217ENST00000553145 ALAS1P13196 640 aa22.02■■□□□ 1.12
HDAC4-217ENST00000553145 PRAMEF19Q5SWL8 479 aa22.02■■□□□ 1.12
HDAC4-217ENST00000553145 DDX11Q96FC9 970 aa22.02■■□□□ 1.12
HDAC4-217ENST00000553145 FGD4Q96M96 766 aa22.02■■□□□ 1.12
HDAC4-217ENST00000553145 CPVLQ9H3G5 476 aa22.02■■□□□ 1.12
HDAC4-217ENST00000553145 ACAD9Q9H845 621 aa22.02■■□□□ 1.12
HDAC4-217ENST00000553145 CDC45O75419 566 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 ICAM1P05362 532 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 CAPN2P17655 700 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 CNGA1P29973 690 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 ANTXR2P58335 489 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 MUM1L1Q5H9M0 696 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 GPATCH4Q5T3I0 446 aaKnown RBP22.01■■□□□ 1.11
HDAC4-217ENST00000553145 IFIT1BQ5T764 474 aaKnown RBP22.01■■□□□ 1.11
HDAC4-217ENST00000553145 RALYLQ86SE5 291 aaKnown RBP22.01■■□□□ 1.11
HDAC4-217ENST00000553145 ANKRD35Q8N283 1001 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 NCOA7Q8NI08 942 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 TRERF1Q96PN7 1200 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 TINF2Q9BSI4 451 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 DDX20Q9UHI6 824 aaKnown RBP22.01■■□□□ 1.11
HDAC4-217ENST00000553145 CCPG1Q9ULG6 757 aa22.01■■□□□ 1.11
HDAC4-217ENST00000553145 SLC27A2O14975 620 aa22■■□□□ 1.11
HDAC4-217ENST00000553145 COL9A3Q14050 684 aaPredicted RBP22■■□□□ 1.11
HDAC4-217ENST00000553145 TKFCQ3LXA3 575 aa22■■□□□ 1.11
HDAC4-217ENST00000553145 CHST3Q7LGC8 479 aa22■■□□□ 1.11
HDAC4-217ENST00000553145 MB21D2Q8IYB1 491 aaPredicted RBP22■■□□□ 1.11
HDAC4-217ENST00000553145 ANKLE1Q8NAG6 615 aa22■■□□□ 1.11
HDAC4-217ENST00000553145 PAWRQ96IZ0 340 aaKnown RBP22■■□□□ 1.11
HDAC4-217ENST00000553145 UBA5Q9GZZ9 404 aa22■■□□□ 1.11
HDAC4-217ENST00000553145 SENP2Q9HC62 589 aa22■■□□□ 1.11
HDAC4-217ENST00000553145 A1CFQ9NQ94 594 aaKnown RBP22■■□□□ 1.11
HDAC4-217ENST00000553145 SMCHD1A6NHR9 2005 aa21.99■■□□□ 1.11
HDAC4-217ENST00000553145 NECTIN1Q15223 517 aa21.99■■□□□ 1.11
HDAC4-217ENST00000553145 IFIT3O14879 490 aaKnown RBP21.98■■□□□ 1.11
HDAC4-217ENST00000553145 CNTN2Q02246 1040 aa21.98■■□□□ 1.11
HDAC4-217ENST00000553145 ASPRV1Q53RT3 343 aa21.98■■□□□ 1.11
HDAC4-217ENST00000553145 PRPF38BQ5VTL8 546 aaKnown RBP21.98■■□□□ 1.11
HDAC4-217ENST00000553145 CREB3L3Q68CJ9 461 aa21.98■■□□□ 1.11
HDAC4-217ENST00000553145 PPP4R2Q9NY27 417 aa21.98■■□□□ 1.11
HDAC4-217ENST00000553145 ANO1Q5XXA6 986 aa21.97■■□□□ 1.11
HDAC4-217ENST00000553145 FAM133AQ8N9E0 248 aa21.97■■□□□ 1.11
HDAC4-217ENST00000553145 SEPT4O43236 478 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 MSCO60682 206 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 SNAI1O95863 264 aaPredicted RBP21.96■■□□□ 1.11
HDAC4-217ENST00000553145 PARP1P09874 1014 aaKnown RBP21.96■■□□□ 1.11
HDAC4-217ENST00000553145 ZNF865P0CJ78 1059 aaPredicted RBP21.96■■□□□ 1.11
HDAC4-217ENST00000553145 CASC1Q6TDU7 716 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 MAMDC4Q6UXC1 1216 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 NECAB2Q7Z6G3 386 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 ZNF467Q7Z7K2 595 aaPredicted RBP21.96■■□□□ 1.11
HDAC4-217ENST00000553145 STAG2Q8N3U4 1231 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 NRBP1Q9UHY1 535 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 LCTP09848 1927 aa21.96■■□□□ 1.11
HDAC4-217ENST00000553145 SOWAHBA6NEL2 793 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 POTEB2H3BUK9 544 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 NFIBO00712 420 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 WTAPQ15007 396 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 TMEM67Q5HYA8 995 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 ERICH6BQ5W0A0 696 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 ADGRF4Q8IZF3 695 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 MSL3Q8N5Y2 521 aaKnown RBP21.95■■□□□ 1.1
HDAC4-217ENST00000553145 IGDCC4Q8TDY8 1250 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 HTATIP2Q9BUP3 242 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 GPHNQ9NQX3 736 aaPredicted RBP21.95■■□□□ 1.1
HDAC4-217ENST00000553145 CYP39A1Q9NYL5 469 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 ASTN1O14525 1302 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 PFASO15067 1338 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 WDR19Q8NEZ3 1342 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 SYNGAP1Q96PV0 1343 aa21.95■■□□□ 1.1
HDAC4-217ENST00000553145 ALPK3Q96L96 1907 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 ERICH2A1L162 156 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 CDC37Q16543 378 aaPredicted RBP21.94■■□□□ 1.1
HDAC4-217ENST00000553145 NSMFQ6X4W1 530 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 CLEC4DQ8WXI8 215 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 DPF3Q92784 378 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 PURBQ96QR8 312 aaKnown RBP21.94■■□□□ 1.1
HDAC4-217ENST00000553145 C11orf49Q9H6J7 331 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 MAD2L2Q9UI95 211 aa21.94■■□□□ 1.1
HDAC4-217ENST00000553145 PRC1O43663 620 aa21.93■■□□□ 1.1
HDAC4-217ENST00000553145 MCM3APO60318 1980 aa21.93■■□□□ 1.1
HDAC4-217ENST00000553145 COL6A1P12109 1028 aa21.93■■□□□ 1.1
HDAC4-217ENST00000553145 SART3Q15020 963 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms