RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 COPB2P35606 906 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 RGS19P49795 217 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 OAZ1P54368 228 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 CACNB2Q08289 660 aaPredicted RBP11.5□□□□□ -0.57
PFDN5-218ENST00000552742 KCTD2Q14681 263 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 WTAPQ15007 396 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 RNF20Q5VTR2 975 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 TRMT44Q8IYL2 757 aaKnown RBP11.5□□□□□ -0.57
PFDN5-218ENST00000552742 APBA2Q99767 749 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 VAT1LQ9HCJ6 419 aa11.5□□□□□ -0.57
PFDN5-218ENST00000552742 PARP1P09874 1014 aaKnown RBP11.49□□□□□ -0.57
PFDN5-218ENST00000552742 ALAS1P13196 640 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
PFDN5-218ENST00000552742 CYP2C19P33261 490 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 SART3Q15020 963 aaKnown RBP11.49□□□□□ -0.57
PFDN5-218ENST00000552742 ADCK5Q3MIX3 580 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 TSGA10IPQ3SY00 556 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 GPATCH4Q5T3I0 446 aaKnown RBP11.49□□□□□ -0.57
PFDN5-218ENST00000552742 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 DDX11Q96FC9 970 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
PFDN5-218ENST00000552742 LY9Q9HBG7 655 aa11.49□□□□□ -0.57
PFDN5-218ENST00000552742 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
PFDN5-218ENST00000552742 MCM3APO60318 1980 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 PALM3A6NDB9 673 aaPredicted RBP11.48□□□□□ -0.57
PFDN5-218ENST00000552742 KLRF2D3W0D1 207 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 REC8O95072 547 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 IGHA2P01877 340 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 ICAM1P05362 532 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 GJB1P08034 283 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
PFDN5-218ENST00000552742 TROAPQ12815 778 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 ZNF792Q3KQV3 632 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 ASPRV1Q53RT3 343 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 MUM1L1Q5H9M0 696 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 MFSD14CQ5VZR4 134 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 ADGRF4Q8IZF3 695 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 ANKRD35Q8N283 1001 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 KCNB2Q92953 911 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 DEFB118Q96PH6 123 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 NEK1Q96PY6 1258 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 USP26Q9BXU7 913 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
PFDN5-218ENST00000552742 RNF146Q9NTX7 359 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 SLC5A4Q9NY91 659 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 FBXO40Q9UH90 709 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 MAD2L2Q9UI95 211 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 SNX14Q9Y5W7 946 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 RPTORQ8N122 1335 aa11.48□□□□□ -0.57
PFDN5-218ENST00000552742 ZNF236Q9UL36 1845 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 DNAJC25-GNG10A0A024R161 153 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 SH2B2O14492 632 aaPredicted RBP11.47□□□□□ -0.57
PFDN5-218ENST00000552742 TFRCP02786 760 aaKnown RBP11.47□□□□□ -0.57
PFDN5-218ENST00000552742 CCND3P30281 292 aaPredicted RBP11.47□□□□□ -0.57
PFDN5-218ENST00000552742 HSPA4P34932 840 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 CNTN2Q02246 1040 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 GRM4Q14833 912 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 TKFCQ3LXA3 575 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 OLFML2BQ68BL8 750 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 NFXL1Q6ZNB6 911 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 TRPV1Q8NER1 839 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 MAML3Q96JK9 1138 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 TMEM87BQ96K49 555 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 TCEANC2Q96MN5 208 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
PFDN5-218ENST00000552742 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.47□□□□□ -0.57
PFDN5-218ENST00000552742 PAK6Q9NQU5 681 aaPredicted RBP11.47□□□□□ -0.57
PFDN5-218ENST00000552742 DHX16O60231 1041 aaKnown RBP11.46□□□□□ -0.57
PFDN5-218ENST00000552742 SGPL1O95470 568 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 CPA1P15085 419 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 GJA8P48165 433 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 KRT32Q14532 448 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 SLC35G1Q2M3R5 365 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.46□□□□□ -0.57
PFDN5-218ENST00000552742 DHX32Q7L7V1 743 aaKnown RBP11.46□□□□□ -0.57
PFDN5-218ENST00000552742 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.57
PFDN5-218ENST00000552742 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 TINF2Q9BSI4 451 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 ACAD9Q9H845 621 aa11.46□□□□□ -0.57
PFDN5-218ENST00000552742 A1CFQ9NQ94 594 aaKnown RBP11.46□□□□□ -0.57
PFDN5-218ENST00000552742 DIS3Q9Y2L1 958 aaKnown RBP11.46□□□□□ -0.57
PFDN5-218ENST00000552742 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
PFDN5-218ENST00000552742 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
PFDN5-218ENST00000552742 CNGA1P29973 690 aa11.45□□□□□ -0.58
PFDN5-218ENST00000552742 LIFRP42702 1097 aa11.45□□□□□ -0.58
PFDN5-218ENST00000552742 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
PFDN5-218ENST00000552742 CDC37Q16543 378 aaPredicted RBP11.45□□□□□ -0.58
PFDN5-218ENST00000552742 USH1GQ495M9 461 aa11.45□□□□□ -0.58
PFDN5-218ENST00000552742 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms