RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 SWAP70Q9UH65 585 aa15.39■□□□□ 0.05
CACNB3-221ENST00000552022 ASTN1O14525 1302 aa15.39■□□□□ 0.05
CACNB3-221ENST00000552022 B4GALT4O60513 344 aa15.38■□□□□ 0.05
CACNB3-221ENST00000552022 ARHGEF15O94989 841 aa15.38■□□□□ 0.05
CACNB3-221ENST00000552022 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
CACNB3-221ENST00000552022 OS9Q13438 667 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-221ENST00000552022 ITGA7Q13683 1181 aa15.38■□□□□ 0.05
CACNB3-221ENST00000552022 FAM83BQ5T0W9 1011 aa15.38■□□□□ 0.05
CACNB3-221ENST00000552022 SNRNP48Q6IEG0 339 aaKnown RBP15.38■□□□□ 0.05
CACNB3-221ENST00000552022 SDR42E1Q8WUS8 393 aa15.38■□□□□ 0.05
CACNB3-221ENST00000552022 ARHGAP45Q92619 1136 aa15.38■□□□□ 0.05
CACNB3-221ENST00000552022 EAF2Q96CJ1 260 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-221ENST00000552022 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
CACNB3-221ENST00000552022 ANP32CO43423 234 aa15.37■□□□□ 0.05
CACNB3-221ENST00000552022 TAP1Q03518 808 aa15.37■□□□□ 0.05
CACNB3-221ENST00000552022 ARMCX2Q7L311 632 aa15.37■□□□□ 0.05
CACNB3-221ENST00000552022 ARNTL2Q8WYA1 636 aa15.37■□□□□ 0.05
CACNB3-221ENST00000552022 TEX13BQ9BXU2 312 aa15.37■□□□□ 0.05
CACNB3-221ENST00000552022 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
CACNB3-221ENST00000552022 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.36■□□□□ 0.05
CACNB3-221ENST00000552022 LPXNO60711 386 aa15.36■□□□□ 0.05
CACNB3-221ENST00000552022 SURF6O75683 361 aaKnown RBP15.36■□□□□ 0.05
CACNB3-221ENST00000552022 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
CACNB3-221ENST00000552022 GRB10Q13322 594 aa15.36■□□□□ 0.05
CACNB3-221ENST00000552022 SSH3Q8TE77 659 aa15.36■□□□□ 0.05
CACNB3-221ENST00000552022 CCDC17Q96LX7 622 aa15.36■□□□□ 0.05
CACNB3-221ENST00000552022 PTPRSQ13332 1948 aa15.36■□□□□ 0.05
CACNB3-221ENST00000552022 TET1Q8NFU7 2136 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 CABYRO75952 493 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 PTGS1P23219 599 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 SLC4A3P48751 1232 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 CDK8P49336 464 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 NHLH1Q02575 133 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 TNFAIP2Q03169 654 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
CACNB3-221ENST00000552022 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 CCDC144CPQ8IYA2 1237 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 LCORLQ8N3X6 602 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
CACNB3-221ENST00000552022 SLF1Q9BQI6 1058 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 KANSL2Q9H9L4 492 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 GOPCQ9HD26 462 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 TNNQ9UQP3 1299 aa15.35■□□□□ 0.05
CACNB3-221ENST00000552022 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
CACNB3-221ENST00000552022 RAD21O60216 631 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 BCAR3O75815 825 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 PDE6AP16499 860 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
CACNB3-221ENST00000552022 PSMC6P62333 389 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
CACNB3-221ENST00000552022 SLC9C2Q5TAH2 1124 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 DEFB128Q7Z7B8 93 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 CPXCR1Q8N123 301 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 SEZ6LQ9BYH1 1024 aa15.34■□□□□ 0.05
CACNB3-221ENST00000552022 CYP2D7A0A087X1C5 515 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 ATP2A1O14983 1001 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 PRKAB2O43741 272 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 PFKMP08237 780 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
CACNB3-221ENST00000552022 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 GJD3Q8N144 294 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 NOP58Q9Y2X3 529 aaKnown RBP15.33■□□□□ 0.04
CACNB3-221ENST00000552022 ZNF532Q9HCE3 1301 aa15.33■□□□□ 0.04
CACNB3-221ENST00000552022 GREB1LQ9C091 1923 aaPredicted RBP15.33■□□□□ 0.04
CACNB3-221ENST00000552022 TCRBV5S4A2TA0A5A2 114 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 TRIM27P14373 513 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 CNTN2Q02246 1040 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 C12orf60Q5U649 245 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 TLK2Q86UE8 772 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 PHOSPHO2Q8TCD6 241 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 FBXL18Q96ME1 805 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 SLC9A7Q96T83 725 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.32■□□□□ 0.04
CACNB3-221ENST00000552022 ALDH8A1Q9H2A2 487 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-221ENST00000552022 ARMT1Q9H993 441 aa15.32■□□□□ 0.04
CACNB3-221ENST00000552022 TRIP12Q14669 1992 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-221ENST00000552022 MYH4Q9Y623 1939 aa15.31■□□□□ 0.04
CACNB3-221ENST00000552022 ZNF318Q5VUA4 2279 aa15.31■□□□□ 0.04
CACNB3-221ENST00000552022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-221ENST00000552022 DYNC1LI2O43237 492 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-221ENST00000552022 CYP2C9P11712 490 aa15.31■□□□□ 0.04
CACNB3-221ENST00000552022 SMPD1P17405 629 aa15.31■□□□□ 0.04
CACNB3-221ENST00000552022 C16orf86Q6ZW13 317 aa15.31■□□□□ 0.04
CACNB3-221ENST00000552022 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
CACNB3-221ENST00000552022 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
CACNB3-221ENST00000552022 RAVER2Q9HCJ3 691 aaKnown RBP15.31■□□□□ 0.04
CACNB3-221ENST00000552022 TRMT13Q9NUP7 481 aaKnown RBP15.31■□□□□ 0.04
CACNB3-221ENST00000552022 ACTN1P12814 892 aa15.3■□□□□ 0.04
CACNB3-221ENST00000552022 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
CACNB3-221ENST00000552022 AP5M1Q9H0R1 490 aa15.3■□□□□ 0.04
CACNB3-221ENST00000552022 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
CACNB3-221ENST00000552022 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
CACNB3-221ENST00000552022 TRIOO75962 3097 aa15.3■□□□□ 0.04
CACNB3-221ENST00000552022 SOWAHBA6NEL2 793 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 KIF28PB7ZC32 967 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 USP17L12C9JPN9 530 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 USP17L21D6R901 530 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms