RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 CYBAP13498 195 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 MNX1P50219 401 aaPredicted RBP19.62■□□□□ 0.73
BRF1-219ENST00000551787 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 TRDNQ13061 729 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 CCDC178Q5BJE1 867 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 BTNL9Q6UXG8 535 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 CHST3Q7LGC8 479 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 CHST13Q8NET6 341 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 ANKS1AQ92625 1134 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 TRERF1Q96PN7 1200 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 RNF146Q9NTX7 359 aa19.62■□□□□ 0.73
BRF1-219ENST00000551787 E7EWF7 191 aa19.61■□□□□ 0.73
BRF1-219ENST00000551787 PRPF38BQ5VTL8 546 aaKnown RBP19.61■□□□□ 0.73
BRF1-219ENST00000551787 STOX1Q6ZVD7 989 aa19.61■□□□□ 0.73
BRF1-219ENST00000551787 TINF2Q9BSI4 451 aa19.61■□□□□ 0.73
BRF1-219ENST00000551787 UBA5Q9GZZ9 404 aa19.61■□□□□ 0.73
BRF1-219ENST00000551787 LSG1Q9H089 658 aaKnown RBP19.61■□□□□ 0.73
BRF1-219ENST00000551787 DDX20Q9UHI6 824 aaKnown RBP19.61■□□□□ 0.73
BRF1-219ENST00000551787 CCPG1Q9ULG6 757 aa19.61■□□□□ 0.73
BRF1-219ENST00000551787 DNAJC25-GNG10A0A024R161 153 aa19.6■□□□□ 0.73
BRF1-219ENST00000551787 SNHG28P0DPA3 235 aa19.6■□□□□ 0.73
BRF1-219ENST00000551787 MUM1L1Q5H9M0 696 aa19.6■□□□□ 0.73
BRF1-219ENST00000551787 NECAB2Q7Z6G3 386 aa19.6■□□□□ 0.73
BRF1-219ENST00000551787 RANBP17Q9H2T7 1088 aaKnown RBP19.6■□□□□ 0.73
BRF1-219ENST00000551787 ACAD9Q9H845 621 aa19.6■□□□□ 0.73
BRF1-219ENST00000551787 FBXO40Q9UH90 709 aa19.6■□□□□ 0.73
BRF1-219ENST00000551787 DIS3Q9Y2L1 958 aaKnown RBP19.6■□□□□ 0.73
BRF1-219ENST00000551787 ZNFX1Q9P2E3 1918 aaKnown RBP19.59■□□□□ 0.73
BRF1-219ENST00000551787 NT5C2P49902 561 aa19.59■□□□□ 0.73
BRF1-219ENST00000551787 IFIT1BQ5T764 474 aaKnown RBP19.59■□□□□ 0.73
BRF1-219ENST00000551787 ANKLE1Q8NAG6 615 aa19.59■□□□□ 0.73
BRF1-219ENST00000551787 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
BRF1-219ENST00000551787 SENP2Q9HC62 589 aa19.59■□□□□ 0.73
BRF1-219ENST00000551787 ANO2Q9NQ90 1003 aa19.59■□□□□ 0.73
BRF1-219ENST00000551787 A1CFQ9NQ94 594 aaKnown RBP19.59■□□□□ 0.73
BRF1-219ENST00000551787 LAMA4Q16363 1823 aa19.59■□□□□ 0.73
BRF1-219ENST00000551787 H0YGN5 161 aa19.58■□□□□ 0.72
BRF1-219ENST00000551787 IFIT3O14879 490 aaKnown RBP19.58■□□□□ 0.72
BRF1-219ENST00000551787 MYCNP04198 464 aaPredicted RBP19.58■□□□□ 0.72
BRF1-219ENST00000551787 ICAM1P05362 532 aa19.58■□□□□ 0.72
BRF1-219ENST00000551787 CAPN2P17655 700 aa19.58■□□□□ 0.72
BRF1-219ENST00000551787 CNTN2Q02246 1040 aa19.58■□□□□ 0.72
BRF1-219ENST00000551787 SEC23AQ15436 765 aa19.58■□□□□ 0.72
BRF1-219ENST00000551787 RALYLQ86SE5 291 aaKnown RBP19.58■□□□□ 0.72
BRF1-219ENST00000551787 ZNF236Q9UL36 1845 aa19.58■□□□□ 0.72
BRF1-219ENST00000551787 POTEB2H3BUK9 544 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 SEPT4O43236 478 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 SNAI1O95863 264 aaPredicted RBP19.57■□□□□ 0.72
BRF1-219ENST00000551787 TKFCQ3LXA3 575 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 GPATCH4Q5T3I0 446 aaKnown RBP19.57■□□□□ 0.72
BRF1-219ENST00000551787 NSMFQ6X4W1 530 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 NCOA7Q8NI08 942 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 FGD4Q96M96 766 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 PURBQ96QR8 312 aaKnown RBP19.57■□□□□ 0.72
BRF1-219ENST00000551787 C11orf49Q9H6J7 331 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 VAT1LQ9HCJ6 419 aa19.57■□□□□ 0.72
BRF1-219ENST00000551787 DDX49Q9Y6V7 483 aaKnown RBP19.57■□□□□ 0.72
BRF1-219ENST00000551787 SLC27A2O14975 620 aa19.56■□□□□ 0.72
BRF1-219ENST00000551787 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
BRF1-219ENST00000551787 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.56■□□□□ 0.72
BRF1-219ENST00000551787 CNPY2Q9Y2B0 182 aa19.56■□□□□ 0.72
BRF1-219ENST00000551787 SOWAHBA6NEL2 793 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 NFIBO00712 420 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 CEP290O15078 2479 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
BRF1-219ENST00000551787 MSCO60682 206 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 CDC45O75419 566 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 ZNF865P0CJ78 1059 aaPredicted RBP19.55■□□□□ 0.72
BRF1-219ENST00000551787 COL9A3Q14050 684 aaPredicted RBP19.55■□□□□ 0.72
BRF1-219ENST00000551787 GJC2Q5T442 439 aaPredicted RBP19.55■□□□□ 0.72
BRF1-219ENST00000551787 CREB3L3Q68CJ9 461 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 STAG2Q8N3U4 1231 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 FAM133AQ8N9E0 248 aa19.55■□□□□ 0.72
BRF1-219ENST00000551787 LENG1Q96BZ8 264 aaPredicted RBP19.55■□□□□ 0.72
BRF1-219ENST00000551787 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
BRF1-219ENST00000551787 EVI5O60447 810 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 ANTXR2P58335 489 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 NECTIN1Q15223 517 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 USH1GQ495M9 461 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 TMEM67Q5HYA8 995 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 MAMDC4Q6UXC1 1216 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 ZNF467Q7Z7K2 595 aaPredicted RBP19.54■□□□□ 0.72
BRF1-219ENST00000551787 MB21D2Q8IYB1 491 aaPredicted RBP19.54■□□□□ 0.72
BRF1-219ENST00000551787 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 SENP6Q9GZR1 1112 aaPredicted RBP19.54■□□□□ 0.72
BRF1-219ENST00000551787 CYP39A1Q9NYL5 469 aa19.54■□□□□ 0.72
BRF1-219ENST00000551787 ZHX1Q9UKY1 873 aaPredicted RBP19.54■□□□□ 0.72
BRF1-219ENST00000551787 PFASO15067 1338 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 SMCHD1A6NHR9 2005 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 ERICH2A1L162 156 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 CENPBP07199 599 aaPredicted RBP19.53■□□□□ 0.72
BRF1-219ENST00000551787 BAATQ14032 418 aaPredicted RBP19.53■□□□□ 0.72
BRF1-219ENST00000551787 WTAPQ15007 396 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 CASC1Q6TDU7 716 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 ARMCX2Q7L311 632 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 CCDC144CPQ8IYA2 1237 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 MSL3Q8N5Y2 521 aaKnown RBP19.53■□□□□ 0.72
BRF1-219ENST00000551787 CLEC4DQ8WXI8 215 aa19.53■□□□□ 0.72
BRF1-219ENST00000551787 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms