RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 SOX10P56693 466 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 FGD1P98174 961 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 EXOSC10Q01780 885 aaKnown RBP16.03■□□□□ 0.16
TROAP-213ENST00000550709 TRIM32Q13049 653 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 KCTD2Q14681 263 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 MTFR1Q15390 333 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 ADGRF4Q8IZF3 695 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 ZNF654Q8IZM8 581 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 TMTC2Q8N394 836 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 PXYLP1Q8TE99 480 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 RANBP17Q9H2T7 1088 aaKnown RBP16.03■□□□□ 0.16
TROAP-213ENST00000550709 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
TROAP-213ENST00000550709 CENPFP49454 3210 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 MYH4Q9Y623 1939 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.16
TROAP-213ENST00000550709 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
TROAP-213ENST00000550709 RXRAP19793 462 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 UBXN2AP68543 259 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 TROAPQ12815 778 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 GRM4Q14833 912 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 BLOC1S2Q6QNY1 142 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 NPLOC4Q8TAT6 608 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 TRIB2Q92519 343 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 MTA3Q9BTC8 594 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 RNF146Q9NTX7 359 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.16
TROAP-213ENST00000550709 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
TROAP-213ENST00000550709 EPB41L2O43491 1005 aaKnown RBP16.01■□□□□ 0.15
TROAP-213ENST00000550709 SEC24BO95487 1268 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 HMGCRP04035 888 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 ICAM1P05362 532 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
TROAP-213ENST00000550709 PSMA5P28066 241 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 LIFRP42702 1097 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 ANKRD35Q8N283 1001 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 CHST13Q8NET6 341 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 DDX11Q96FC9 970 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 TMEM106CQ9BVX2 250 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 ACAD9Q9H845 621 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 FLRT1Q9NZU1 646 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 FBXO40Q9UH90 709 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
TROAP-213ENST00000550709 RLFQ13129 1914 aa16.01■□□□□ 0.15
TROAP-213ENST00000550709 DDAH1O94760 285 aa16■□□□□ 0.15
TROAP-213ENST00000550709 CCL5P13501 91 aa16■□□□□ 0.15
TROAP-213ENST00000550709 CDC37Q16543 378 aaPredicted RBP16■□□□□ 0.15
TROAP-213ENST00000550709 TKFCQ3LXA3 575 aa16■□□□□ 0.15
TROAP-213ENST00000550709 USH1GQ495M9 461 aa16■□□□□ 0.15
TROAP-213ENST00000550709 MUM1L1Q5H9M0 696 aa16■□□□□ 0.15
TROAP-213ENST00000550709 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
TROAP-213ENST00000550709 Q6ZUG5 572 aa16■□□□□ 0.15
TROAP-213ENST00000550709 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
TROAP-213ENST00000550709 PIBF1Q8WXW3 757 aa16■□□□□ 0.15
TROAP-213ENST00000550709 RNF208Q9H0X6 261 aa16■□□□□ 0.15
TROAP-213ENST00000550709 UNC93B1Q9H1C4 597 aa16■□□□□ 0.15
TROAP-213ENST00000550709 SLC5A4Q9NY91 659 aa16■□□□□ 0.15
TROAP-213ENST00000550709 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 HOXC6P09630 235 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
TROAP-213ENST00000550709 RPS6KB1P23443 525 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 CYP2C19P33261 490 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 SLC35G1Q2M3R5 365 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 QRICH1Q2TAL8 776 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 MFSD14CQ5VZR4 134 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 NSMFQ6X4W1 530 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 MICU3Q86XE3 530 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 TRMT44Q8IYL2 757 aaKnown RBP15.99■□□□□ 0.15
TROAP-213ENST00000550709 BRPF3Q9ULD4 1205 aa15.99■□□□□ 0.15
TROAP-213ENST00000550709 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
TROAP-213ENST00000550709 KIF5BP33176 963 aa15.98■□□□□ 0.15
TROAP-213ENST00000550709 ZNF792Q3KQV3 632 aa15.98■□□□□ 0.15
TROAP-213ENST00000550709 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
TROAP-213ENST00000550709 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
TROAP-213ENST00000550709 BRF1Q92994 677 aa15.98■□□□□ 0.15
TROAP-213ENST00000550709 UPF3BQ9BZI7 483 aaKnown RBP15.98■□□□□ 0.15
TROAP-213ENST00000550709 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 KLF18A0A0U1RQI7 1052 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 NFIBO00712 420 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
TROAP-213ENST00000550709 PLEKHA8P1O95397 391 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 CALM1P0DP23 149 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 CALM2P0DP24 149 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 CALM3P0DP25 149 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 CACNB2Q08289 660 aaPredicted RBP15.97■□□□□ 0.15
TROAP-213ENST00000550709 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 APOA5Q6Q788 366 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 CMTR1Q8N1G2 835 aaKnown RBP15.97■□□□□ 0.15
TROAP-213ENST00000550709 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 FANCBQ8NB91 859 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 MAML3Q96JK9 1138 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 PIGSQ96S52 555 aa15.97■□□□□ 0.15
TROAP-213ENST00000550709 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms