RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CYP2D6P10635 497 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 CYBAP13498 195 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 AKR1B1P15121 316 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 ADORA2AP29274 412 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 PRSS12P56730 875 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 ICA1Q05084 483 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 C12orf60Q5U649 245 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 OLFML2BQ68BL8 750 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 DPP9Q86TI2 863 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 SIAH1Q8IUQ4 282 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 ABRAQ8N0Z2 381 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 MROH8Q9H579 483 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 VCPKMTQ9H867 229 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 PRKAG2Q9UGJ0 569 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 MYO5AQ9Y4I1 1855 aaKnown RBP9.17□□□□□ -0.94
NEK3-201ENST00000550331 A0A0G2JMZ2 1700 aa9.17□□□□□ -0.94
NEK3-201ENST00000550331 MYH1P12882 1939 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 USP17L21D6R901 530 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 PRKAB2O43741 272 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 FLOT1O75955 427 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 ERCC3P19447 782 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 CNGA1P29973 690 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 CYP2C19P33261 490 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 KIAA1755Q5JYT7 1200 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 C16orf86Q6ZW13 317 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 MYLIPQ8WY64 445 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
NEK3-201ENST00000550331 DYNLL2Q96FJ2 89 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 LRRCC1Q9C099 1032 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 SENP6Q9GZR1 1112 aaPredicted RBP9.16□□□□□ -0.94
NEK3-201ENST00000550331 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 SLC5A4Q9NY91 659 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 ARPP21Q9UBL0 812 aaPredicted RBP9.16□□□□□ -0.94
NEK3-201ENST00000550331 RCAN3Q9UKA8 241 aa9.16□□□□□ -0.94
NEK3-201ENST00000550331 RLFQ13129 1914 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 MAP3K7O43318 606 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 SLC25A27O95847 323 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 CDK8P49336 464 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
NEK3-201ENST00000550331 SLFNL1Q499Z3 407 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 CLEC10AQ8IUN9 316 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 SPICE1Q8N0Z3 855 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 ARRDC4Q8NCT1 418 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 TRPV1Q8NER1 839 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 ATG4CQ96DT6 458 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 PRR14Q9BWN1 585 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 BCL11AQ9H165 835 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 SEMA6BQ9H3T3 888 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 ECHDC1Q9NTX5 307 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 ADAMTS5Q9UNA0 930 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 SLC4A4Q9Y6R1 1079 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 MUC3AQ02505 3323 aa9.15□□□□□ -0.94
NEK3-201ENST00000550331 CYP2D7A0A087X1C5 515 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 SMIM22K7EJ46 135 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 SEPT4O43236 478 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 COBLO75128 1261 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 FCER1AP12319 257 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 EEF2P13639 858 aaKnown RBP9.14□□□□□ -0.95
NEK3-201ENST00000550331 FOSL2P15408 326 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 COPB2P35606 906 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
NEK3-201ENST00000550331 RTP1P59025 263 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 PLS1Q14651 629 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 SHHQ15465 462 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 GIMAP6Q6P9H5 292 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 CTR9Q6PD62 1173 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 NCAPG2Q86XI2 1143 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 MAML3Q96JK9 1138 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 PUS7LQ9H0K6 701 aaKnown RBP9.14□□□□□ -0.95
NEK3-201ENST00000550331 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 NRBP1Q9UHY1 535 aa9.14□□□□□ -0.95
NEK3-201ENST00000550331 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 MYO9BQ13459 2157 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 KBTBD13C9JR72 458 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 CHGBP05060 677 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 TMEM132BQ14DG7 1078 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 SNX17Q15036 470 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 SBK1Q52WX2 424 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 C9orf50Q5SZB4 431 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 RIOX2Q8IUF8 465 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 KBTBD3Q8NAB2 608 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 GPATCH3Q96I76 525 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 STRBPQ96SI9 672 aaKnown RBP9.13□□□□□ -0.95
NEK3-201ENST00000550331 TTYH1Q9H313 450 aaPredicted RBP9.13□□□□□ -0.95
NEK3-201ENST00000550331 PPP1R9AQ9ULJ8 1098 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 ATP11BQ9Y2G3 1177 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 DIS3Q9Y2L1 958 aaKnown RBP9.13□□□□□ -0.95
NEK3-201ENST00000550331 PCDHB3Q9Y5E6 796 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 NCOR1O75376 2440 aa9.13□□□□□ -0.95
NEK3-201ENST00000550331 VWA5AO00534 786 aa9.12□□□□□ -0.95
NEK3-201ENST00000550331 SMARCA5O60264 1052 aaPredicted RBP9.12□□□□□ -0.95
NEK3-201ENST00000550331 ZFYP08048 801 aaPredicted RBP9.12□□□□□ -0.95
NEK3-201ENST00000550331 SMAD3P84022 425 aaKnown RBP9.12□□□□□ -0.95
NEK3-201ENST00000550331 KCTD2Q14681 263 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms