RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 ZBTB21Q9ULJ3 1066 aa18.83■□□□□ 0.61
ATXN2-219ENST00000550104 C12orf60Q5U649 245 aa18.83■□□□□ 0.61
ATXN2-219ENST00000550104 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.61
ATXN2-219ENST00000550104 ICA1Q05084 483 aa18.83■□□□□ 0.6
ATXN2-219ENST00000550104 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
ATXN2-219ENST00000550104 SLFN13Q68D06 897 aa18.83■□□□□ 0.6
ATXN2-219ENST00000550104 DDX25Q9UHL0 483 aaKnown RBP18.83■□□□□ 0.6
ATXN2-219ENST00000550104 GDAQ9Y2T3 454 aa18.83■□□□□ 0.6
ATXN2-219ENST00000550104 WTIPA6NIX2 430 aaPredicted RBP18.83■□□□□ 0.6
ATXN2-219ENST00000550104 DPF2Q92785 391 aa18.83■□□□□ 0.6
ATXN2-219ENST00000550104 ARHGEF10LQ9HCE6 1279 aa18.83■□□□□ 0.6
ATXN2-219ENST00000550104 ASPRV1Q53RT3 343 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 ZNF658Q5TYW1 1059 aaPredicted RBP18.82■□□□□ 0.6
ATXN2-219ENST00000550104 CEP95Q96GE4 821 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 GJD4Q96KN9 370 aaPredicted RBP18.82■□□□□ 0.6
ATXN2-219ENST00000550104 CACNB3P54284 484 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 RAPGEF1Q13905 1077 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 ILDR1Q86SU0 546 aaPredicted RBP18.82■□□□□ 0.6
ATXN2-219ENST00000550104 CCDC51Q96ER9 411 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 OSBPL5Q9H0X9 879 aaPredicted RBP18.82■□□□□ 0.6
ATXN2-219ENST00000550104 GOLGA6L10A6NI86 522 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 USP17L5A8MUK1 530 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.69e-7■■■■□ 20.5
ATXN2-219ENST00000550104 CETN1Q12798 172 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 PRR16Q569H4 304 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 ARL6IP4Q66PJ3 421 aaKnown RBP18.82■□□□□ 0.6
ATXN2-219ENST00000550104 JAKMIP2Q96AA8 810 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 NUP58Q9BVL2 599 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 MYO6Q9UM54 1294 aa18.82■□□□□ 0.6
ATXN2-219ENST00000550104 PLCG1P19174 1290 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 LAD1O00515 517 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 RBM43Q6ZSC3 357 aaKnown RBP18.81■□□□□ 0.6
ATXN2-219ENST00000550104 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 STK32BQ9NY57 414 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 CCDC174Q6PII3 467 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 PHF20Q9BVI0 1012 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 TNS2Q63HR2 1409 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 RGPD1P0DJD0 1748 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 SOWAHDA6NJG2 315 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 PP2D1A8MPX8 630 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
ATXN2-219ENST00000550104 DNM2P50570 870 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 UBE2SQ16763 222 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 PRR5LQ6MZQ0 368 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 HS2ST1Q7LGA3 356 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 RIOK1Q9BRS2 568 aaKnown RBP18.8■□□□□ 0.6
ATXN2-219ENST00000550104 MED1Q15648 1581 aaPredicted RBP18.8■□□□□ 0.6
ATXN2-219ENST00000550104 MMP10P09238 476 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 PRPF4BQ13523 1007 aaKnown RBP18.8■□□□□ 0.6
ATXN2-219ENST00000550104 NTRK3Q16288 839 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 ARMCX5Q6P1M9 558 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 TXNRD3Q86VQ6 643 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 SPICE1Q8N0Z3 855 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 DNM3Q9UQ16 869 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 B4DLN1 442 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 TMC4Q7Z404 712 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 JDP2Q8WYK2 163 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 CETN3O15182 167 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 PTPAQ15257 358 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 COA1Q9GZY4 146 aa18.8■□□□□ 0.6
ATXN2-219ENST00000550104 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 SALL1Q9NSC2 1324 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 GDF11O95390 407 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 CDR1P51861 262 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 HLTFQ14527 1009 aaKnown RBP eCLIP18.79■□□□□ 0.6
ATXN2-219ENST00000550104 GRM4Q14833 912 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 GPATCH4Q5T3I0 446 aaKnown RBP18.79■□□□□ 0.6
ATXN2-219ENST00000550104 TAF3Q5VWG9 929 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 TYW1BQ6NUM6 668 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 GPBP1Q86WP2 473 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 FBXL16Q8N461 479 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 AK8Q96MA6 479 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 TUBGCP2Q9BSJ2 902 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.79■□□□□ 0.6
ATXN2-219ENST00000550104 SH3GLB2Q9NR46 395 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 CHD2O14647 1828 aaKnown RBP18.79■□□□□ 0.6
ATXN2-219ENST00000550104 RIC1Q4ADV7 1423 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 ERLIN2O94905 339 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 ADRA2BP18089 450 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 DLGAP5Q15398 846 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 RRAGAQ7L523 313 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 KIFC2Q96AC6 838 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 NT5C3AQ9H0P0 336 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 SWAP70Q9UH65 585 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 RWDD2AQ9UIY3 292 aa18.79■□□□□ 0.6
ATXN2-219ENST00000550104 TROAPQ12815 778 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 LARP4BQ92615 738 aaKnown RBP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 TUBE1Q9UJT0 475 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 LMAN1P49257 510 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 NAA30Q147X3 362 aaPredicted RBP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 MYOCDQ8IZQ8 938 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 CNOT6LQ96LI5 555 aaKnown RBP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 FAM196BA6NMK8 535 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 ATP2C1P98194 919 aaPredicted RBP18.78■□□□□ 0.6
ATXN2-219ENST00000550104 KRT31Q15323 416 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 CPXCR1Q8N123 301 aa18.78■□□□□ 0.6
ATXN2-219ENST00000550104 CCDC17Q96LX7 622 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms