RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CTDP1Q9Y5B0 961 aaPredicted RBP15.9■□□□□ 0.14
GCN1-206ENST00000549815 PGK1P00558 417 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 ADCYAP1R1P41586 468 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 MDM2Q00987 491 aaPredicted RBP15.89■□□□□ 0.13
GCN1-206ENST00000549815 ANKRD35Q8N283 1001 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 CHMP4CQ96CF2 233 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 AGBL1Q96MI9 1066 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 UBE2OQ9C0C9 1292 aaKnown RBP15.89■□□□□ 0.13
GCN1-206ENST00000549815 KATNBL1Q9H079 304 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 PRR12Q9ULL5 1215 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 CNPY2Q9Y2B0 182 aa15.89■□□□□ 0.13
GCN1-206ENST00000549815 MYCNP04198 464 aaPredicted RBP15.88■□□□□ 0.13
GCN1-206ENST00000549815 TRIM60Q495X7 471 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 FAM133AQ8N9E0 248 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 FERMT2Q96AC1 680 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 TMEM47Q9BQJ4 181 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 ACAD9Q9H845 621 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 A1CFQ9NQ94 594 aaKnown RBP15.88■□□□□ 0.13
GCN1-206ENST00000549815 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.88■□□□□ 0.13
GCN1-206ENST00000549815 ATP11BQ9Y2G3 1177 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 LCTP09848 1927 aa15.88■□□□□ 0.13
GCN1-206ENST00000549815 LAMA4Q16363 1823 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 LAMA2P24043 3122 aaKnown RBP15.87■□□□□ 0.13
GCN1-206ENST00000549815 ADCY6O43306 1168 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 HAND2P61296 217 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 CNTN2Q02246 1040 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 TKFCQ3LXA3 575 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 CCSAPQ6IQ19 270 aaPredicted RBP15.87■□□□□ 0.13
GCN1-206ENST00000549815 BTNL9Q6UXG8 535 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 RNF180Q86T96 592 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 TBC1D10CQ8IV04 446 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 DCAF4Q8WV16 495 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 HOMER2Q9NSB8 354 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 RNF146Q9NTX7 359 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 ZHX1Q9UKY1 873 aaPredicted RBP15.87■□□□□ 0.13
GCN1-206ENST00000549815 FAM184BQ9ULE4 1060 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 SYNRGQ9UMZ2 1314 aa15.87■□□□□ 0.13
GCN1-206ENST00000549815 LRRC37A2A6NM11 1700 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 SOWAHBA6NEL2 793 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 TOP1P11387 765 aaKnown RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 PCP11498 1178 aaKnown RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 SNAP25P60880 206 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 IKQ13123 557 aaPredicted RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 TTBK2Q6IQ55 1244 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 GPR153Q6NV75 609 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 ARMCX2Q7L311 632 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 TRERF1Q96PN7 1200 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 TSEN34Q9BSV6 310 aaKnown RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 RANBP17Q9H2T7 1088 aaKnown RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 ABHD16BQ9H3Z7 469 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 PDLIM7Q9NR12 457 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 TOMM22Q9NS69 142 aa15.86■□□□□ 0.13
GCN1-206ENST00000549815 ISY1Q9ULR0 285 aaKnown RBP15.86■□□□□ 0.13
GCN1-206ENST00000549815 COL6A3P12111 3177 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 A0A1W2PQ45 241 aaPredicted RBP15.85■□□□□ 0.13
GCN1-206ENST00000549815 A0A1W2PQY0 241 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 MYADML2A6NDP7 307 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 DUSP11O75319 330 aaKnown RBP15.85■□□□□ 0.13
GCN1-206ENST00000549815 MUM1L1Q5H9M0 696 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 TTC14Q96N46 770 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 MTMR7Q9Y216 660 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 ASTN1O14525 1302 aa15.85■□□□□ 0.13
GCN1-206ENST00000549815 TRIM43BA6NCK2 446 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 SNHG28P0DPA3 235 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 PDHBP11177 359 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 ALAS1P13196 640 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 CST5P28325 142 aaPredicted RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 SLC16A2P36021 539 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 MFAP1P55081 439 aaKnown RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 IRX5P78411 483 aaPredicted RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 CCDC96Q2M329 555 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 CCDC144BQ3MJ40 725 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 MFSD6Q6ZSS7 791 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 TRIM43Q96BQ3 446 aaPredicted RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 UPF3AQ9H1J1 476 aaKnown RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 CYP39A1Q9NYL5 469 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 PRKAG2Q9UGJ0 569 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
GCN1-206ENST00000549815 NEDD4P46934 1319 aa15.84■□□□□ 0.13
GCN1-206ENST00000549815 MOXD2PA6NHM9 499 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 CTAGE5O15320 804 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 ICAM1P05362 532 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 PDE4AP27815 886 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 ACLYP53396 1101 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 GJA9P57773 515 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 NKX3-2P78367 333 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 TLE2Q04725 743 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 SYDE2Q5VT97 1194 aa15.83■□□□□ 0.12
GCN1-206ENST00000549815 LBHD1Q9BQE6 289 aaPredicted RBP15.83■□□□□ 0.12
GCN1-206ENST00000549815 RNF41Q9H4P4 317 aaPredicted RBP15.83■□□□□ 0.12
GCN1-206ENST00000549815 FRMPD2Q68DX3 1309 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms