RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
RAB5C-204ENST00000547517 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
RAB5C-204ENST00000547517 CYP2C19P33261 490 aa13.85□□□□□ -0.19
RAB5C-204ENST00000547517 SEC23AQ15436 765 aa13.85□□□□□ -0.19
RAB5C-204ENST00000547517 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
RAB5C-204ENST00000547517 MB21D2Q8IYB1 491 aaPredicted RBP13.85□□□□□ -0.19
RAB5C-204ENST00000547517 RANBP17Q9H2T7 1088 aaKnown RBP13.85□□□□□ -0.19
RAB5C-204ENST00000547517 RNF146Q9NTX7 359 aa13.85□□□□□ -0.19
RAB5C-204ENST00000547517 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
RAB5C-204ENST00000547517 ALAS1P13196 640 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 ANTXR2P58335 489 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 SART3Q15020 963 aaKnown RBP13.84□□□□□ -0.19
RAB5C-204ENST00000547517 NECTIN1Q15223 517 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
RAB5C-204ENST00000547517 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 CHST13Q8NET6 341 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 MAML3Q96JK9 1138 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 ACAD9Q9H845 621 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 FBXO40Q9UH90 709 aa13.84□□□□□ -0.19
RAB5C-204ENST00000547517 PLXNA1Q9UIW2 1896 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 SGPL1O95470 568 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 ICAM1P05362 532 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 PARP1P09874 1014 aaKnown RBP13.83□□□□□ -0.2
RAB5C-204ENST00000547517 WTAPQ15007 396 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 ZNF792Q3KQV3 632 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 TMEM67Q5HYA8 995 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 RNF20Q5VTR2 975 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 ANKRD35Q8N283 1001 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 DDX11Q96FC9 970 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 UBA5Q9GZZ9 404 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 SENP2Q9HC62 589 aa13.83□□□□□ -0.2
RAB5C-204ENST00000547517 TNRC18O15417 2968 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-204ENST00000547517 PRC1O43663 620 aa13.82□□□□□ -0.2
RAB5C-204ENST00000547517 DHX16O60231 1041 aaKnown RBP13.82□□□□□ -0.2
RAB5C-204ENST00000547517 FARP2O94887 1054 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-204ENST00000547517 TFRCP02786 760 aaKnown RBP13.82□□□□□ -0.2
RAB5C-204ENST00000547517 CYBAP13498 195 aa13.82□□□□□ -0.2
RAB5C-204ENST00000547517 CNGA1P29973 690 aa13.82□□□□□ -0.2
RAB5C-204ENST00000547517 TKFCQ3LXA3 575 aa13.82□□□□□ -0.2
RAB5C-204ENST00000547517 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
RAB5C-204ENST00000547517 TRERF1Q96PN7 1200 aa13.82□□□□□ -0.2
RAB5C-204ENST00000547517 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
RAB5C-204ENST00000547517 FRMPD3Q5JV73 1810 aa13.81□□□□□ -0.2
RAB5C-204ENST00000547517 DNAJC25-GNG10A0A024R161 153 aa13.81□□□□□ -0.2
RAB5C-204ENST00000547517 IGHA2P01877 340 aa13.81□□□□□ -0.2
RAB5C-204ENST00000547517 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-204ENST00000547517 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-204ENST00000547517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB5C-204ENST00000547517 TRPV1Q8NER1 839 aa13.81□□□□□ -0.2
RAB5C-204ENST00000547517 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
RAB5C-204ENST00000547517 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-204ENST00000547517 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
RAB5C-204ENST00000547517 ZNFX1Q9P2E3 1918 aaKnown RBP13.81□□□□□ -0.2
RAB5C-204ENST00000547517 MCM5P33992 734 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 USH1GQ495M9 461 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 PRAMEF19Q5SWL8 479 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 NSMFQ6X4W1 530 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 TINF2Q9BSI4 451 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 DDX20Q9UHI6 824 aaKnown RBP13.8□□□□□ -0.2
RAB5C-204ENST00000547517 PFASO15067 1338 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 WDR19Q8NEZ3 1342 aa13.8□□□□□ -0.2
RAB5C-204ENST00000547517 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 NFIBO00712 420 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 SH2B2O14492 632 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-204ENST00000547517 REC8O95072 547 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 GRM4Q14833 912 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 ANO1Q5XXA6 986 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 CATIPQ7Z7H3 387 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 DIS3LQ8TF46 1054 aaKnown RBP13.79□□□□□ -0.2
RAB5C-204ENST00000547517 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 TMEM87BQ96K49 555 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 FGD4Q96M96 766 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 MYL10Q9BUA6 226 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 LRRC2Q9BYS8 371 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 MAD2L2Q9UI95 211 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 OGDHLQ9ULD0 1010 aa13.79□□□□□ -0.2
RAB5C-204ENST00000547517 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 DDAH1O94760 285 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 CNTN2Q02246 1040 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 QRICH1Q2TAL8 776 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 SLC30A10Q6XR72 485 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 UBE2Q1Q7Z7E8 422 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-204ENST00000547517 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 PNMA2Q9UL42 364 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
RAB5C-204ENST00000547517 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms