RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 KIF2CQ99661 725 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 ZSWIM5Q9P217 1185 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 NRBP1Q9UHY1 535 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 TMX2Q9Y320 296 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 TNKSO95271 1327 aa14.13□□□□□ -0.15
HDAC7-226ENST00000547259 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
HDAC7-226ENST00000547259 WDR46O15213 610 aaKnown RBP14.12□□□□□ -0.15
HDAC7-226ENST00000547259 NMT2O60551 498 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 FLOT1O75955 427 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 FCER1AP12319 257 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 ERCC3P19447 782 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 FGD1P98174 961 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 ICA1Q05084 483 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 COL9A3Q14050 684 aaPredicted RBP14.12□□□□□ -0.15
HDAC7-226ENST00000547259 PLS1Q14651 629 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 NCAPG2Q86XI2 1143 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 ZSCAN10Q96SZ4 725 aaPredicted RBP14.12□□□□□ -0.15
HDAC7-226ENST00000547259 SMCHD1A6NHR9 2005 aa14.12□□□□□ -0.15
HDAC7-226ENST00000547259 RLFQ13129 1914 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 A0A1W2PRG0 241 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 POTEB2H3BUK9 544 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 IGHA2P01877 340 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 NEK4P51957 841 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 ATN1P54259 1190 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-226ENST00000547259 RTP1P59025 263 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 EXOSC10Q01780 885 aaKnown RBP14.11□□□□□ -0.15
HDAC7-226ENST00000547259 WTAPQ15007 396 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 TMEM67Q5HYA8 995 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 Q6ZUG5 572 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 CLEC10AQ8IUN9 316 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 CEP95Q96GE4 821 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 TMEM87BQ96K49 555 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.11□□□□□ -0.15
HDAC7-226ENST00000547259 LRRC2Q9BYS8 371 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 VCPKMTQ9H867 229 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 PDRG1Q9NUG6 133 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 TCP11L1Q9NUJ3 509 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
HDAC7-226ENST00000547259 IGKV6D-41A0A0C4DH26 115 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 SH2B2O14492 632 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-226ENST00000547259 C1orf53Q5VUE5 145 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 SLC39A5Q6ZMH5 540 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 Q7L0L9 218 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 MTA3Q9BTC8 594 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 GOPCQ9HD26 462 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 IL17RBQ9NRM6 502 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 ATP11BQ9Y2G3 1177 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 DIS3Q9Y2L1 958 aaKnown RBP14.1□□□□□ -0.15
HDAC7-226ENST00000547259 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
HDAC7-226ENST00000547259 TTLL1O95922 423 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 KCTD2Q14681 263 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 GJC2Q5T442 439 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-226ENST00000547259 IFIT1BQ5T764 474 aaKnown RBP14.09□□□□□ -0.15
HDAC7-226ENST00000547259 ZNF697Q5TEC3 545 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 RNF180Q86T96 592 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 ENAHQ8N8S7 591 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-226ENST00000547259 TRPV1Q8NER1 839 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 MTMR4Q9NYA4 1195 aa14.09□□□□□ -0.15
HDAC7-226ENST00000547259 UNC80Q8N2C7 3258 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 ST18O60284 1047 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 COBLO75128 1261 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 RARBP10826 455 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 EEF2P13639 858 aaKnown RBP14.08□□□□□ -0.16
HDAC7-226ENST00000547259 SNX17Q15036 470 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 SEC23AQ15436 765 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 DGKHQ86XP1 1220 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 LRRC47Q8N1G4 583 aaKnown RBP14.08□□□□□ -0.16
HDAC7-226ENST00000547259 MSL3Q8N5Y2 521 aaKnown RBP14.08□□□□□ -0.16
HDAC7-226ENST00000547259 IGDCC4Q8TDY8 1250 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 BRF1Q92994 677 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 MAML3Q96JK9 1138 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 TTC14Q96N46 770 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 LY9Q9HBG7 655 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-226ENST00000547259 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 CLIP2Q9UDT6 1046 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 ADAMTS5Q9UNA0 930 aa14.08□□□□□ -0.16
HDAC7-226ENST00000547259 PARP14Q460N5 1801 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 CCDC69A6NI79 296 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-226ENST00000547259 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
HDAC7-226ENST00000547259 STAT3P40763 770 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 AK2P54819 239 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 LRRC41Q15345 812 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 RCSD1Q6JBY9 416 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 NOL8Q76FK4 1167 aaKnown RBP14.07□□□□□ -0.16
HDAC7-226ENST00000547259 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 SPICE1Q8N0Z3 855 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 ATG4CQ96DT6 458 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 MMP19Q99542 508 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 NAP1L2Q9ULW6 460 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-226ENST00000547259 PLXNA1Q9UIW2 1896 aa14.07□□□□□ -0.16
HDAC7-226ENST00000547259 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms