RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 NDUFB10O96000 172 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 PARP1P09874 1014 aaKnown RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 CCT2P78371 535 aaKnown RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 ST3GAL1Q11201 340 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 TRIM32Q13049 653 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 GPATCH4Q5T3I0 446 aaKnown RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 CPLX2Q6PUV4 134 aaKnown RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 C7orf61Q8IZ16 206 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 NECAB1Q8N987 351 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 C12orf42Q96LP6 360 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 LZTS2Q9BRK4 669 aa26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 LLPHQ9BRT6 129 aaKnown RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 FAM217BQ9NTX9 383 aaPredicted RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 ZMYND8Q9ULU4 1186 aaPredicted RBP26.01■■□□□ 1.75
SLC38A1-203ENST00000546519 PALM3A6NDB9 673 aaPredicted RBP26■■□□□ 1.75
SLC38A1-203ENST00000546519 RXRAP19793 462 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 ZNF543Q08ER8 600 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 FAM110CQ1W6H9 321 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 SH3D19Q5HYK7 790 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 USP17L2Q6R6M4 530 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 RAB11FIP4Q86YS3 637 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 CCDC83Q8IWF9 413 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 MAD2L2Q9UI95 211 aa26■■□□□ 1.75
SLC38A1-203ENST00000546519 CDC27P30260 824 aa25.99■■□□□ 1.75
SLC38A1-203ENST00000546519 MTMR2Q13614 643 aa25.99■■□□□ 1.75
SLC38A1-203ENST00000546519 NECAB2Q7Z6G3 386 aa25.99■■□□□ 1.75
SLC38A1-203ENST00000546519 NCOA5Q9HCD5 579 aaKnown RBP25.99■■□□□ 1.75
SLC38A1-203ENST00000546519 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.99■■□□□ 1.75
SLC38A1-203ENST00000546519 COL6A3P12111 3177 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 CPLX1O14810 134 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 CDKL5O76039 1030 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 SMARCA1P28370 1054 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 SLC1A4P43007 532 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 TMTC3Q6ZXV5 915 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 CCDC144CPQ8IYA2 1237 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 IPO9Q96P70 1041 aaKnown RBP25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 PNMA3Q9UL41 463 aa25.98■■□□□ 1.75
SLC38A1-203ENST00000546519 WDR46O15213 610 aaKnown RBP25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 BMP3P12645 472 aa25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 IFNAR1P17181 557 aa25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 ADD1P35611 737 aaKnown RBP25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 HMGCS2P54868 508 aa25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 NTRK3Q16288 839 aa25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 PROCA1Q8NCQ7 364 aaPredicted RBP25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 GDF15Q99988 308 aa25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 DAXXQ9UER7 740 aaPredicted RBP25.97■■□□□ 1.75
SLC38A1-203ENST00000546519 SYN1P17600 705 aa25.96■■□□□ 1.75
SLC38A1-203ENST00000546519 CCDC96Q2M329 555 aa25.96■■□□□ 1.75
SLC38A1-203ENST00000546519 EMILIN3Q9NT22 766 aa25.96■■□□□ 1.75
SLC38A1-203ENST00000546519 GJD2Q9UKL4 321 aa25.96■■□□□ 1.75
SLC38A1-203ENST00000546519 MTMR7Q9Y216 660 aa25.96■■□□□ 1.75
SLC38A1-203ENST00000546519 PEX10O60683 326 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 PLA2G6O60733 806 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 HMGCRP04035 888 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 HSP90AA1P07900 732 aaKnown RBP25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 MNX1P50219 401 aaPredicted RBP25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 KIAA1755Q5JYT7 1200 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 STAG2Q8N3U4 1231 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 NSUN7Q8NE18 718 aaKnown RBP25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 SMARCC2Q8TAQ2 1214 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 TMOD4Q9NZQ9 345 aa25.95■■□□□ 1.74
SLC38A1-203ENST00000546519 KLRF2D3W0D1 207 aa25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 RAD21O60216 631 aa25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 CAPN2P17655 700 aa25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 HMGN5P82970 282 aaKnown RBP25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 ZYXQ15942 572 aaKnown RBP25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 BTNL9Q6UXG8 535 aa25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 RASGRP2Q7LDG7 609 aa25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 SPZ1Q9BXG8 430 aa25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 ASCC2Q9H1I8 757 aaPredicted RBP25.94■■□□□ 1.74
SLC38A1-203ENST00000546519 STK36Q9NRP7 1315 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 PLEKHA8P1O95397 391 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 CTDNEP1O95476 244 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 VCAM1P19320 739 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 FUT2Q10981 343 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 Q7L0L9 218 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 SPICE1Q8N0Z3 855 aa25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 HMX1Q9NP08 348 aaPredicted RBP25.93■■□□□ 1.74
SLC38A1-203ENST00000546519 FRMPD2Q68DX3 1309 aaPredicted RBP25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 RPTORQ8N122 1335 aa25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 GOLGA8HP0CJ92 632 aa25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 GCLCP48506 637 aaPredicted RBP25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 FAM83BQ5T0W9 1011 aa25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 KCTD1Q719H9 257 aa25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 SRBD1Q8N5C6 995 aaKnown RBP25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 ANKLE1Q8NAG6 615 aa25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 TRIB2Q92519 343 aa25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 RNF26Q9BY78 433 aaPredicted RBP25.92■■□□□ 1.74
SLC38A1-203ENST00000546519 CNTNAP5Q8WYK1 1306 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 PTPDC1A2A3K4 754 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 BMP8BP34820 402 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 FAM160B2Q86V87 743 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 TRIM22Q8IYM9 498 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 CHURC1Q8WUH1 139 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 NUP88Q99567 741 aaPredicted RBP25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 RIOX1Q9H6W3 641 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 GPCPD1Q9NPB8 672 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 FEM1BQ9UK73 627 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 SMC3Q9UQE7 1217 aa25.91■■□□□ 1.74
SLC38A1-203ENST00000546519 MYH6P13533 1939 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms