RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 CARD6Q9BX69 1037 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 TRIM4Q9C037 500 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 NACA2Q9H009 215 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 FAM204AQ9H8W3 233 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 RAB21Q9UL25 225 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 L1RE1Q9UN81 338 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 SLC4A4Q9Y6R1 1079 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 CCDC69A6NI79 296 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 ZNF213O14771 459 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 JAK2O60674 1132 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 HARSP12081 509 aaKnown RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 CHRNA5P30532 468 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 HOXA10P31260 410 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 SLC8A1P32418 973 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 MCM2P49736 904 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 SCNN1BP51168 640 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 PSMC1P62191 440 aaKnown RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 GPSM2P81274 684 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 GUCY1B3Q02153 619 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 EVX2Q03828 476 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 ACTN3Q08043 901 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 SNCBQ16143 134 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 SLC10A5Q5PT55 438 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 BZW1Q7L1Q6 419 aaKnown RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 LUZP1Q86V48 1076 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 MYOCDQ8IZQ8 938 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 TRIM58Q8NG06 486 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 VCPKMTQ9H867 229 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 PAPOLBQ9NRJ5 636 aaKnown RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 AATFQ9NY61 560 aaKnown RBP eCLIP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 WDR37Q9Y2I8 494 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 ATP8A1Q9Y2Q0 1164 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 PARP3Q9Y6F1 533 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 TMEM221A6NGB7 291 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 B4E1Z4 1266 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 FOXP2O15409 715 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 GJB2P29033 226 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 AARSP49588 968 aaKnown RBP eCLIP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 SESN3P58005 492 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 TMEM62Q0P6H9 643 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 POSTNQ15063 836 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 TTF1Q15361 905 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 IMMTQ16891 758 aaKnown RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 DOK7Q18PE1 504 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 INF2Q27J81 1249 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 RALYLQ86SE5 291 aaKnown RBP7.47□□□□□ -1.21
NECAP1-208ENST00000545807 CCDC82Q8N4S0 544 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 NEK9Q8TD19 979 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 AFAP1L1Q8TED9 768 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 NAPBQ9H115 298 aa7.47□□□□□ -1.21
NECAP1-208ENST00000545807 ANKRD36CQ5JPF3 1778 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 POLRMTO00411 1230 aaKnown RBP7.46□□□□□ -1.21
NECAP1-208ENST00000545807 GBP2P32456 591 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-208ENST00000545807 FLT3P36888 993 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 ARHGAP25P42331 645 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 SF3B2Q13435 895 aaKnown RBP7.46□□□□□ -1.21
NECAP1-208ENST00000545807 TOB2Q14106 344 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-208ENST00000545807 GRIK5Q16478 980 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 KBTBD12Q3ZCT8 623 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 ARMC9Q7Z3E5 817 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 APBB1IPQ7Z5R6 666 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-208ENST00000545807 SCLT1Q96NL6 688 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 MYL10Q9BUA6 226 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 MXD3Q9BW11 206 aa7.46□□□□□ -1.21
NECAP1-208ENST00000545807 SBF2Q86WG5 1849 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 WDR33Q9C0J8 1336 aaKnown RBP7.46□□□□□ -1.22
NECAP1-208ENST00000545807 A6NHS1 94 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 G3V3G9 751 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 KIF5CO60282 957 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 CAVIN2O95810 425 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 ZFYP08048 801 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-208ENST00000545807 LINGO3P0C6S8 592 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 TXLNAP40222 546 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 TYRO3Q06418 890 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 GRAPQ13588 217 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 UBE4AQ14139 1066 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 SLMAPQ14BN4 828 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 NAA16Q6N069 864 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-208ENST00000545807 GRAPLQ8TC17 118 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-208ENST00000545807 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 EPC1Q9H2F5 836 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 TRPC6Q9Y210 931 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 C4BP0C0L5 1744 aa7.46□□□□□ -1.22
NECAP1-208ENST00000545807 BAZ2BQ9UIF8 2168 aaKnown RBP7.46□□□□□ -1.22
NECAP1-208ENST00000545807 MEFVO15553 781 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 TIMM44O43615 452 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 ZNF189O75820 626 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 STIP1P31948 543 aaKnown RBP7.45□□□□□ -1.22
NECAP1-208ENST00000545807 CUL3Q13618 768 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 Q4G0T1 1027 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 CCDC40Q4G0X9 1142 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 TRIM65Q6PJ69 517 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 SYNE3Q6ZMZ3 975 aa7.45□□□□□ -1.22
NECAP1-208ENST00000545807 EBF2Q9HAK2 575 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms