RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 MYH4Q9Y623 1939 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 PSMD14O00487 310 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 KINO60870 393 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 TTLL1O95922 423 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 PARP1P09874 1014 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC192P0DO97 292 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 SNHG28P0DPA3 235 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 XRCC6P12956 609 aaKnown RBP eCLIP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 AKR1B1P15121 316 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CD46P15529 392 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 TRAPPC10P48553 1259 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 USP46P62068 366 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CEBPZQ03701 1054 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 FAM160A1Q05DH4 1040 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 SLC39A14Q15043 492 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 PTPAQ15257 358 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 FKBP1CQ5VVH2 108 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 GALNT17Q6IS24 598 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CCAR1Q8IX12 1150 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CMTR1Q8N1G2 835 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC82Q8N4S0 544 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 OGFOD1Q8N543 542 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 FSIP1Q8NA03 581 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC12Q8WUD4 166 aaPredicted RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 ZNF516Q92618 1163 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 ANP32BQ92688 251 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 FUCA2Q9BTY2 467 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 TNMDQ9H2S6 317 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 DNAJC18Q9H819 358 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 GJB4Q9NTQ9 266 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 MTMR4Q9NYA4 1195 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 DACT1Q9NYF0 836 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 VPS54Q9P1Q0 977 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 PI4KBQ9UBF8 816 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 PCDHA7Q9UN72 937 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 KCNJ14Q9UNX9 436 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 CLIC4Q9Y696 253 aa6.27□□□□□ -1.41
NPIPB3-214ENST00000545358 FAM237AA0A1B0GTK4 181 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 BTBD18B2RXH4 712 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 UBE2Q2LH0YL09 131 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 CUTAO60888 179 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 RAD17O75943 681 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 PDHBP11177 359 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 CMA1P23946 247 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 RPS12P25398 132 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 TNIP1Q15025 636 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 R3HDM1Q15032 1099 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 NPY5RQ15761 445 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 GPATCH4Q5T3I0 446 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 CIAPIN1Q6FI81 312 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 PPP1R18Q6NYC8 613 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 TATDN1Q6P1N9 297 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 TMEM179Q6ZVK1 233 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 FOXP4Q8IVH2 680 aaPredicted RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 NLRP7Q8WX94 980 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 JDP2Q8WYK2 163 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 TNFRSF25Q93038 417 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 SHISA4Q96DD7 197 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 GOLPH3LQ9H4A5 285 aa6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 SEC63Q9UGP8 760 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 HERC5Q9UII4 1024 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 V9GY48 417 aaPredicted RBP6.26□□□□□ -1.41
NPIPB3-214ENST00000545358 ESYT2A0FGR8 921 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 DDTLA6NHG4 134 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 TRIM75PA6NK02 468 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 KLRF2D3W0D1 207 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 STXBP3O00186 592 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 NFKBIEO00221 500 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 CYTH3O43739 400 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 MYO1BO43795 1136 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 CAVIN2O95810 425 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 CACNB3P54284 484 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 NLRP5P59047 1200 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 CCDC173Q0VFZ6 552 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 TCP10Q12799 353 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 NR5A1Q13285 461 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 SNW1Q13573 536 aaKnown RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 TTLL12Q14166 644 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 UVSSAQ2YD98 709 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 CERKLQ49MI3 558 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 MORN1Q5T089 497 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 AXDND1Q5T1B0 1012 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 RESP18Q5W5W9 173 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 WWC2Q6AWC2 1192 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 SH3BP5LQ7L8J4 393 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 FAM83AQ86UY5 434 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 SCUBE3Q8IX30 993 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 FMR1NBQ8N0W7 255 aaPredicted RBP6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 STAG2Q8N3U4 1231 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 ENGASEQ8NFI3 743 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 DCAF4Q8WV16 495 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 FAM151AQ8WW52 585 aa6.25□□□□□ -1.41
NPIPB3-214ENST00000545358 RRP36Q96EU6 259 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms