RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
CIT-216ENST00000544872 NFXL1Q6ZNB6 911 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 ASCC2Q9H1I8 757 aaPredicted RBP11.13□□□□□ -0.63
CIT-216ENST00000544872 RPAP3Q9H6T3 665 aaPredicted RBP11.13□□□□□ -0.63
CIT-216ENST00000544872 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 PNMA2Q9UL42 364 aa11.13□□□□□ -0.63
CIT-216ENST00000544872 SLC27A2O14975 620 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 BMP3P12645 472 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
CIT-216ENST00000544872 VCAM1P19320 739 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 GUCY1A2P33402 732 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 JAG1P78504 1218 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 EVX2Q03828 476 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 WTAPQ15007 396 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 TBC1D10CQ8IV04 446 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 SPICE1Q8N0Z3 855 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 PRPF38AQ8NAV1 312 aaKnown RBP11.12□□□□□ -0.63
CIT-216ENST00000544872 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
CIT-216ENST00000544872 FEM1BQ9UK73 627 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 ATRXP46100 2492 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
CIT-216ENST00000544872 CCDC69A6NI79 296 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 ALADP13716 330 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 COPB2P35606 906 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 HERVK_113P62684 666 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 TRAF1Q13077 416 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 GPATCH4Q5T3I0 446 aaKnown RBP11.11□□□□□ -0.63
CIT-216ENST00000544872 GMCL1Q96IK5 515 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 INCENPQ9NQS7 918 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 RABGAP1Q9Y3P9 1069 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 CFAP54Q96N23 3096 aa11.11□□□□□ -0.63
CIT-216ENST00000544872 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 DOCK2Q92608 1830 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 IGKV6D-41A0A0C4DH26 115 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 TLL1O43897 1013 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 NDUFB10O96000 172 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 CALM1P0DP23 149 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 CALM2P0DP24 149 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 CALM3P0DP25 149 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 KIF5BP33176 963 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 STAT2P52630 851 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 COL9A2Q14055 689 aaPredicted RBP11.1□□□□□ -0.63
CIT-216ENST00000544872 PLS1Q14651 629 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 SHROOM1Q2M3G4 852 aaPredicted RBP11.1□□□□□ -0.63
CIT-216ENST00000544872 TSGA10IPQ3SY00 556 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 LRRC47Q8N1G4 583 aaKnown RBP11.1□□□□□ -0.63
CIT-216ENST00000544872 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 HERVK_113Q902F9 699 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 TMEM47Q9BQJ4 181 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 PAGR1Q9BTK6 254 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
CIT-216ENST00000544872 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 IVNS1ABPQ9Y6Y0 642 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 PLIN4Q96Q06 1357 aa11.1□□□□□ -0.63
CIT-216ENST00000544872 TNKSO95271 1327 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 NEDD4P46934 1319 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 LTBP2Q14767 1821 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 DOCK3Q8IZD9 2030 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 PRC1O43663 620 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
CIT-216ENST00000544872 RGS20O76081 388 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 MAPK4P31152 587 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
CIT-216ENST00000544872 HSPA4P34932 840 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 MOGSQ13724 837 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 FAM110CQ1W6H9 321 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 FAM83BQ5T0W9 1011 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 WDR78Q5VTH9 848 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
CIT-216ENST00000544872 SIAH1Q8IUQ4 282 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 CTCFLQ8NI51 663 aaPredicted RBP11.09□□□□□ -0.63
CIT-216ENST00000544872 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 IL25Q9H293 177 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 SLC12A7Q9Y666 1083 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 CYP46A1Q9Y6A2 500 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 AK9Q5TCS8 1911 aa11.09□□□□□ -0.63
CIT-216ENST00000544872 TPRP12270 2363 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms