RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 GTF2A2P52657 109 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 KIF23Q02241 960 aaPredicted RBP12.28□□□□□ -0.44
DDB1-221ENST00000543162 FSTL1Q12841 308 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 RESTQ13127 1097 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 COG2Q14746 738 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 CCDC174Q6PII3 467 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 DIS3L2Q8IYB7 885 aaKnown RBP12.28□□□□□ -0.44
DDB1-221ENST00000543162 COA7Q96BR5 231 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
DDB1-221ENST00000543162 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
DDB1-221ENST00000543162 PCDHA1Q9Y5I3 950 aa12.28□□□□□ -0.44
DDB1-221ENST00000543162 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 ZBED4O75132 1171 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 ZBTB48P10074 688 aaPredicted RBP12.27□□□□□ -0.45
DDB1-221ENST00000543162 CETPP11597 493 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 DSG3P32926 999 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 KRT2P35908 639 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
DDB1-221ENST00000543162 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
DDB1-221ENST00000543162 PABPC4Q13310 644 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDB1-221ENST00000543162 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 TYW1BQ6NUM6 668 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 BRAPQ7Z569 592 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 FOXP1Q9H334 677 aaPredicted RBP12.27□□□□□ -0.45
DDB1-221ENST00000543162 C6orf50Q9HD87 102 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 HOXC10Q9NYD6 342 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 AGTPBP1Q9UPW5 1226 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 MYPNQ86TC9 1320 aa12.27□□□□□ -0.45
DDB1-221ENST00000543162 PARP14Q460N5 1801 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 TMEM88BA6NKF7 163 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 BTBD18B2RXH4 712 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 KIF28PB7ZC32 967 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 VWA5AO00534 786 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 U2AF2P26368 475 aaKnown RBP eCLIP12.26□□□□□ -0.455e-14■■■■■ 54.8
DDB1-221ENST00000543162 GNA11P29992 359 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 HOXA7P31268 230 aaPredicted RBP12.26□□□□□ -0.45
DDB1-221ENST00000543162 ADCY7P51828 1080 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 IRX3P78415 501 aaPredicted RBP12.26□□□□□ -0.45
DDB1-221ENST00000543162 MOGSQ13724 837 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 FOXD4L6Q3SYB3 417 aaPredicted RBP12.26□□□□□ -0.45
DDB1-221ENST00000543162 USH1GQ495M9 461 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 FOXD4L3Q6VB84 417 aaPredicted RBP12.26□□□□□ -0.45
DDB1-221ENST00000543162 BLIDQ8IZY5 108 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 ATG4CQ96DT6 458 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 ZMYND12Q9H0C1 365 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 ABT1Q9ULW3 272 aaKnown RBP12.26□□□□□ -0.45
DDB1-221ENST00000543162 PCDHA4Q9UN74 947 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 TLL2Q9Y6L7 1015 aa12.26□□□□□ -0.45
DDB1-221ENST00000543162 CCL15-CCL14A0A0B4J2E2 113 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 ICAM1P05362 532 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 OSBPP22059 807 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 MRPL12P52815 198 aaKnown RBP12.25□□□□□ -0.45
DDB1-221ENST00000543162 NR5A1Q13285 461 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 NPY5RQ15761 445 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 CCL15Q16663 113 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 CPXCR1Q8N123 301 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 DAGLBQ8NCG7 672 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 MS4A4AQ96JQ5 239 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 ASCC2Q9H1I8 757 aaPredicted RBP12.25□□□□□ -0.45
DDB1-221ENST00000543162 PSTPIP2Q9H939 334 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 ADAMTS5Q9UNA0 930 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 RLFQ13129 1914 aa12.25□□□□□ -0.45
DDB1-221ENST00000543162 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
DDB1-221ENST00000543162 ZNF536O15090 1300 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 ABCB11O95342 1321 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 BAG4O95429 457 aaKnown RBP12.24□□□□□ -0.45
DDB1-221ENST00000543162 FAM173BQ6P4H8 233 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
DDB1-221ENST00000543162 BRI3BPQ8WY22 251 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 CUL5Q93034 780 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 RAVER2Q9HCJ3 691 aaKnown RBP12.24□□□□□ -0.45
DDB1-221ENST00000543162 RIC8AQ9NPQ8 531 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
DDB1-221ENST00000543162 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
DDB1-221ENST00000543162 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 SLC10A3P09131 477 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
DDB1-221ENST00000543162 NCLP19338 710 aaKnown RBP12.23□□□□□ -0.45
DDB1-221ENST00000543162 OAZ1P54368 228 aa12.23□□□□□ -0.45
DDB1-221ENST00000543162 DNM1Q05193 864 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms