RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 TRPV1Q8NER1 839 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 UBAC1Q9BSL1 405 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 KAT14Q9H8E8 782 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 GPCPD1Q9NPB8 672 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 OGDHLQ9ULD0 1010 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 FRMPD2Q68DX3 1309 aaPredicted RBP18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 SMCHD1A6NHR9 2005 aa18.13■□□□□ 0.49
ECHDC2-223ENST00000542552 CYBAP13498 195 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 SNAP25P60880 206 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 NECTIN1Q15223 517 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 TKFCQ3LXA3 575 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 FRMPD3Q5JV73 1810 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 DNAH12Q6ZR08 3092 aa18.12■□□□□ 0.49
ECHDC2-223ENST00000542552 CDC45O75419 566 aa18.11■□□□□ 0.49
ECHDC2-223ENST00000542552 ICAM1P05362 532 aa18.11■□□□□ 0.49
ECHDC2-223ENST00000542552 SLC4A3P48751 1232 aa18.11■□□□□ 0.49
ECHDC2-223ENST00000542552 MNX1P50219 401 aaPredicted RBP18.11■□□□□ 0.49
ECHDC2-223ENST00000542552 CCDC174Q6PII3 467 aa18.11■□□□□ 0.49
ECHDC2-223ENST00000542552 NCOA7Q8NI08 942 aa18.11■□□□□ 0.49
ECHDC2-223ENST00000542552 FARP2O94887 1054 aaPredicted RBP18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 IFIT1BQ5T764 474 aaKnown RBP18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 MB21D2Q8IYB1 491 aaPredicted RBP18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 TINF2Q9BSI4 451 aa18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 ACAD9Q9H845 621 aa18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 ANO2Q9NQ90 1003 aa18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 RNF146Q9NTX7 359 aa18.1■□□□□ 0.49
ECHDC2-223ENST00000542552 SLC27A2O14975 620 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 GOLGA8HP0CJ92 632 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 ANTXR2P58335 489 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 ASPRV1Q53RT3 343 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 MAMDC4Q6UXC1 1216 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 ZNF467Q7Z7K2 595 aaPredicted RBP18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 ANKRD35Q8N283 1001 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 MSL3Q8N5Y2 521 aaKnown RBP18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 FGD4Q96M96 766 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 TRERF1Q96PN7 1200 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 HOMER2Q9NSB8 354 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 NRBP1Q9UHY1 535 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
ECHDC2-223ENST00000542552 ALAS1P13196 640 aa18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 PRAMEF19Q5SWL8 479 aa18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 FAM133AQ8N9E0 248 aa18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 IGDCC4Q8TDY8 1250 aa18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 A1CFQ9NQ94 594 aaKnown RBP18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 DDX20Q9UHI6 824 aaKnown RBP18.08■□□□□ 0.48
ECHDC2-223ENST00000542552 WDR19Q8NEZ3 1342 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 SYNGAP1Q96PV0 1343 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 IFIT3O14879 490 aaKnown RBP18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 SEPT4O43236 478 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 MSCO60682 206 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 CHST3Q7LGC8 479 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 DIS3LQ8TF46 1054 aaKnown RBP18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 PAWRQ96IZ0 340 aaKnown RBP18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 MTA3Q9BTC8 594 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 CPVLQ9H3G5 476 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 SENP2Q9HC62 589 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 PNMA2Q9UL42 364 aa18.07■□□□□ 0.48
ECHDC2-223ENST00000542552 LCTP09848 1927 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 PFASO15067 1338 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 CEP290O15078 2479 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 PARP1P09874 1014 aaKnown RBP18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 CNGA1P29973 690 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 CNTN2Q02246 1040 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 COL9A3Q14050 684 aaPredicted RBP18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 CYP39A1Q9NYL5 469 aa18.06■□□□□ 0.48
ECHDC2-223ENST00000542552 MCM3APO60318 1980 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 ERICH2A1L162 156 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 PALM3A6NDB9 673 aaPredicted RBP18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 SNAI1O95863 264 aaPredicted RBP18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 ZNF865P0CJ78 1059 aaPredicted RBP18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 TROAPQ12815 778 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 WTAPQ15007 396 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 SART3Q15020 963 aaKnown RBP18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 TMEM67Q5HYA8 995 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 PRPF38BQ5VTL8 546 aaKnown RBP18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 NECAB2Q7Z6G3 386 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 STAG2Q8N3U4 1231 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 CLEC4DQ8WXI8 215 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
ECHDC2-223ENST00000542552 SOWAHBA6NEL2 793 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 COL6A1P12109 1028 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 MCM5P33992 734 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 TSGA10IPQ3SY00 556 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 HTATIP2Q9BUP3 242 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 JMJD4Q9H9V9 463 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 LY9Q9HBG7 655 aa18.04■□□□□ 0.48
ECHDC2-223ENST00000542552 ALPK3Q96L96 1907 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms