RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 POTEFA5A3E0 1075 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 COBLO75128 1261 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 TRIM32Q13049 653 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 KRT32Q14532 448 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 CHST13Q8NET6 341 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 IGDCC4Q8TDY8 1250 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 TMEM87BQ96K49 555 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 MTA3Q9BTC8 594 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 UBA5Q9GZZ9 404 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 RNF208Q9H0X6 261 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 UNC93B1Q9H1C4 597 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 CPVLQ9H3G5 476 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 FBXO40Q9UH90 709 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 CCPG1Q9ULG6 757 aa23.44■■□□□ 1.34
RAP1B-223ENST00000541167 ALAS1P13196 640 aa23.43■■□□□ 1.34
RAP1B-223ENST00000541167 HSPA4P34932 840 aa23.43■■□□□ 1.34
RAP1B-223ENST00000541167 COL9A3Q14050 684 aaPredicted RBP23.43■■□□□ 1.34
RAP1B-223ENST00000541167 TSGA10IPQ3SY00 556 aa23.43■■□□□ 1.34
RAP1B-223ENST00000541167 LY9Q9HBG7 655 aa23.43■■□□□ 1.34
RAP1B-223ENST00000541167 GPHNQ9NQX3 736 aaPredicted RBP23.43■■□□□ 1.34
RAP1B-223ENST00000541167 RNF146Q9NTX7 359 aa23.43■■□□□ 1.34
RAP1B-223ENST00000541167 FLRT1Q9NZU1 646 aa23.43■■□□□ 1.34
RAP1B-223ENST00000541167 SH2B2O14492 632 aaPredicted RBP23.42■■□□□ 1.34
RAP1B-223ENST00000541167 DHX16O60231 1041 aaKnown RBP23.42■■□□□ 1.34
RAP1B-223ENST00000541167 ICAM1P05362 532 aa23.42■■□□□ 1.34
RAP1B-223ENST00000541167 PGK2P07205 417 aa23.42■■□□□ 1.34
RAP1B-223ENST00000541167 TKFCQ3LXA3 575 aa23.42■■□□□ 1.34
RAP1B-223ENST00000541167 CATIPQ7Z7H3 387 aa23.42■■□□□ 1.34
RAP1B-223ENST00000541167 DDX11Q96FC9 970 aa23.42■■□□□ 1.34
RAP1B-223ENST00000541167 ACAD9Q9H845 621 aa23.42■■□□□ 1.34
RAP1B-223ENST00000541167 PRKAR2AP13861 404 aaKnown RBP23.41■■□□□ 1.34
RAP1B-223ENST00000541167 GRM4Q14833 912 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 ADCK5Q3MIX3 580 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 MFSD14CQ5VZR4 134 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 NFXL1Q6ZNB6 911 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 ANKRD35Q8N283 1001 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 TRERF1Q96PN7 1200 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 LRRC2Q9BYS8 371 aa23.41■■□□□ 1.34
RAP1B-223ENST00000541167 EPB41L2O43491 1005 aaKnown RBP23.4■■□□□ 1.34
RAP1B-223ENST00000541167 TAL1P17542 331 aaPredicted RBP23.4■■□□□ 1.34
RAP1B-223ENST00000541167 ZNF654Q8IZM8 581 aa23.4■■□□□ 1.34
RAP1B-223ENST00000541167 STAG2Q8N3U4 1231 aa23.4■■□□□ 1.34
RAP1B-223ENST00000541167 NUP133Q8WUM0 1156 aa23.4■■□□□ 1.34
RAP1B-223ENST00000541167 KCNB2Q92953 911 aa23.4■■□□□ 1.34
RAP1B-223ENST00000541167 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.4■■□□□ 1.348e-42■■■■■ 28.4
RAP1B-223ENST00000541167 SNX14Q9Y5W7 946 aa23.4■■□□□ 1.34
RAP1B-223ENST00000541167 RPTORQ8N122 1335 aa23.39■■□□□ 1.34
RAP1B-223ENST00000541167 WDR19Q8NEZ3 1342 aa23.39■■□□□ 1.34
RAP1B-223ENST00000541167 CCDC69A6NI79 296 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 CACNB2Q08289 660 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-223ENST00000541167 TROAPQ12815 778 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 CDC37Q16543 378 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-223ENST00000541167 MAP3K21Q5TCX8 1036 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 OLFML2BQ68BL8 750 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.39■■□□□ 1.33
RAP1B-223ENST00000541167 DHX32Q7L7V1 743 aaKnown RBP23.39■■□□□ 1.33
RAP1B-223ENST00000541167 ADGRF4Q8IZF3 695 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 TMTC2Q8N394 836 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 MAML3Q96JK9 1138 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 TCEANC2Q96MN5 208 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 HMX1Q9NP08 348 aaPredicted RBP23.39■■□□□ 1.33
RAP1B-223ENST00000541167 MAD2L2Q9UI95 211 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 PNMA2Q9UL42 364 aa23.39■■□□□ 1.33
RAP1B-223ENST00000541167 PALM3A6NDB9 673 aaPredicted RBP23.38■■□□□ 1.33
RAP1B-223ENST00000541167 KLRF2D3W0D1 207 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 DDAH1O94760 285 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 GJB1P08034 283 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 EN2P19622 333 aaPredicted RBP23.38■■□□□ 1.33
RAP1B-223ENST00000541167 CYP2C19P33261 490 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 ZNF792Q3KQV3 632 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 JAKMIP1Q96N16 626 aaKnown RBP23.38■■□□□ 1.33
RAP1B-223ENST00000541167 MYL10Q9BUA6 226 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 VAT1LQ9HCJ6 419 aa23.38■■□□□ 1.33
RAP1B-223ENST00000541167 HMGB1P09429 215 aaKnown RBP23.37■■□□□ 1.33
RAP1B-223ENST00000541167 LIFRP42702 1097 aa23.37■■□□□ 1.33
RAP1B-223ENST00000541167 MUM1L1Q5H9M0 696 aa23.37■■□□□ 1.33
RAP1B-223ENST00000541167 DEFB118Q96PH6 123 aa23.37■■□□□ 1.33
RAP1B-223ENST00000541167 PAK6Q9NQU5 681 aaPredicted RBP23.37■■□□□ 1.33
RAP1B-223ENST00000541167 DIS3Q9Y2L1 958 aaKnown RBP23.37■■□□□ 1.33
RAP1B-223ENST00000541167 FRMPD3Q5JV73 1810 aa23.36■■□□□ 1.33
RAP1B-223ENST00000541167 BAZ2BQ9UIF8 2168 aaKnown RBP23.36■■□□□ 1.33
RAP1B-223ENST00000541167 DNAJC25-GNG10A0A024R161 153 aa23.36■■□□□ 1.33
RAP1B-223ENST00000541167 EXOSC10Q01780 885 aaKnown RBP23.36■■□□□ 1.33
RAP1B-223ENST00000541167 USH1GQ495M9 461 aa23.36■■□□□ 1.33
RAP1B-223ENST00000541167 CTCFLQ8NI51 663 aaPredicted RBP23.36■■□□□ 1.33
RAP1B-223ENST00000541167 U2AF1L4Q8WU68 220 aaKnown RBP23.36■■□□□ 1.33
RAP1B-223ENST00000541167 USP26Q9BXU7 913 aa23.36■■□□□ 1.33
RAP1B-223ENST00000541167 JMJD4Q9H9V9 463 aa23.36■■□□□ 1.33
RAP1B-223ENST00000541167 A1CFQ9NQ94 594 aaKnown RBP23.36■■□□□ 1.33
RAP1B-223ENST00000541167 MCM3APO60318 1980 aa23.36■■□□□ 1.33
RAP1B-223ENST00000541167 PFASO15067 1338 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 LCTP09848 1927 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 CCND3P30281 292 aaPredicted RBP23.35■■□□□ 1.33
RAP1B-223ENST00000541167 GJA8P48165 433 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 QRICH1Q2TAL8 776 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 BLOC1S2Q6QNY1 142 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 NSMFQ6X4W1 530 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 SLC12A7Q9Y666 1083 aa23.35■■□□□ 1.33
RAP1B-223ENST00000541167 POTEB2H3BUK9 544 aa23.34■■□□□ 1.33
RAP1B-223ENST00000541167 IGHA2P01877 340 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms