RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FBXO11Q86XK2 927 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 NOSTRINQ8IVI9 506 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 PRPF38AQ8NAV1 312 aaKnown RBP18.57■□□□□ 0.56
TRAF3-204ENST00000539721 AMNQ9BXJ7 453 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 C6orf50Q9HD87 102 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 PCDHA4Q9UN74 947 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
TRAF3-204ENST00000539721 SMCO2A6NFE2 343 aa18.56■□□□□ 0.56
TRAF3-204ENST00000539721 BLIDQ8IZY5 108 aa18.56■□□□□ 0.56
TRAF3-204ENST00000539721 ZNF396Q96N95 335 aaPredicted RBP18.56■□□□□ 0.56
TRAF3-204ENST00000539721 ZMYND12Q9H0C1 365 aa18.56■□□□□ 0.56
TRAF3-204ENST00000539721 RANBP17Q9H2T7 1088 aaKnown RBP18.56■□□□□ 0.56
TRAF3-204ENST00000539721 ESYT2A0FGR8 921 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 CXCL11O14625 94 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 GNA11P29992 359 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 MYSM1Q5VVJ2 828 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 DAGLBQ8NCG7 672 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 KCNH4Q9UQ05 1017 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 PCDHA1Q9Y5I3 950 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
TRAF3-204ENST00000539721 DDX11L8A8MPP1 907 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 USH1GQ495M9 461 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 CCDC174Q6PII3 467 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 GADL1Q6ZQY3 521 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
TRAF3-204ENST00000539721 TFIP11Q9UBB9 837 aaKnown RBP18.55■□□□□ 0.56
TRAF3-204ENST00000539721 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
TRAF3-204ENST00000539721 RLFQ13129 1914 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L15C9J2P7 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L13C9JLJ4 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L11C9JVI0 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L18D6R9N7 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L22D6RA61 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L17D6RBQ6 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L19D6RCP7 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L20D6RJB6 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 FIBPO43427 364 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 ADCY7P51828 1080 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 USP17L24Q0WX57 530 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 TRAF1Q13077 416 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 CST9Q5W186 159 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 GDPD2Q9HCC8 539 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 CFAP45Q9UL16 551 aa18.54■□□□□ 0.56
TRAF3-204ENST00000539721 KIF3CO14782 793 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 ADAMTS3O15072 1205 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 ATL3Q6DD88 541 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 CATSPERGQ6ZRH7 1159 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 PROCA1Q8NCQ7 364 aaPredicted RBP18.53■□□□□ 0.56
TRAF3-204ENST00000539721 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 TNFRSF25Q93038 417 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 CTDP1Q9Y5B0 961 aaPredicted RBP18.53■□□□□ 0.56
TRAF3-204ENST00000539721 GJA5P36382 358 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 RASGRP4Q8TDF6 673 aa18.53■□□□□ 0.56
TRAF3-204ENST00000539721 ZBED4O75132 1171 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 CEBPZQ03701 1054 aaKnown RBP18.52■□□□□ 0.55
TRAF3-204ENST00000539721 CSPP1Q1MSJ5 1256 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 TREML2Q5T2D2 321 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 CUL5Q93034 780 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 ATG4CQ96DT6 458 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 WNK4Q96J92 1243 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 USP28Q96RU2 1077 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 SCAND2PQ9GZW5 306 aaPredicted RBP18.52■□□□□ 0.55
TRAF3-204ENST00000539721 RIC8AQ9NPQ8 531 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 PCDHA6Q9UN73 950 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 PCDHA8Q9Y5H6 950 aa18.52■□□□□ 0.55
TRAF3-204ENST00000539721 COL11A1P12107 1806 aaPredicted RBP18.52■□□□□ 0.55
TRAF3-204ENST00000539721 M0R2N6 131 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 FDX1P10109 184 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
TRAF3-204ENST00000539721 DSG3P32926 999 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 SNAPC2Q13487 334 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 COG2Q14746 738 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 EARS2Q5JPH6 523 aaKnown RBP18.51■□□□□ 0.55
TRAF3-204ENST00000539721 PIK3AP1Q6ZUJ8 805 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 REXO1Q8N1G1 1221 aaKnown RBP18.51■□□□□ 0.55
TRAF3-204ENST00000539721 SMC1BQ8NDV3 1235 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 FTOQ9C0B1 505 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAF3-204ENST00000539721 SLC38A10Q9HBR0 1119 aa18.51■□□□□ 0.55
TRAF3-204ENST00000539721 CCDC194A0A1B0GVG4 234 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 FAM205CA6NFA0 338 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
TRAF3-204ENST00000539721 ICAM1P05362 532 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 PTMSP20962 102 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 MRPL12P52815 198 aaKnown RBP18.5■□□□□ 0.55
TRAF3-204ENST00000539721 HUNKP57058 714 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
TRAF3-204ENST00000539721 RILPL1Q5EBL4 403 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 FASTKD5Q7L8L6 764 aaKnown RBP18.5■□□□□ 0.55
TRAF3-204ENST00000539721 SPATA32Q96LK8 384 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 GLT8D2Q9H1C3 349 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 PSTPIP2Q9H939 334 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 BIN2Q9UBW5 565 aaPredicted RBP18.5■□□□□ 0.55
TRAF3-204ENST00000539721 NOL7Q9UMY1 257 aaKnown RBP18.5■□□□□ 0.55
TRAF3-204ENST00000539721 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 SMCHD1A6NHR9 2005 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 ABCB11O95342 1321 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 MYPNQ86TC9 1320 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 VWA5AO00534 786 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 TMEM87AQ8NBN3 555 aa18.5■□□□□ 0.55
TRAF3-204ENST00000539721 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms