RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CLEC17AQ6ZS10 378 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 HOMER1Q86YM7 354 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 TNPO1Q92973 898 aaKnown RBP12.28□□□□□ -0.44
LEMD3-202ENST00000539442 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 CPVLQ9H3G5 476 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 VAT1LQ9HCJ6 419 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 BARHL2Q9NY43 387 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 KCNH4Q9UQ05 1017 aa12.28□□□□□ -0.44
LEMD3-202ENST00000539442 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
LEMD3-202ENST00000539442 FDX1P10109 184 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 CALML3P27482 149 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 FOSBP53539 338 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 HMGCS2P54868 508 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 GUCY1B3Q02153 619 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.45
LEMD3-202ENST00000539442 RESTQ13127 1097 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 CDC37Q16543 378 aaPredicted RBP12.27□□□□□ -0.45
LEMD3-202ENST00000539442 WWC2Q6AWC2 1192 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
LEMD3-202ENST00000539442 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
LEMD3-202ENST00000539442 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 PIBF1Q8WXW3 757 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 OPTNQ96CV9 577 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 VPS54Q9P1Q0 977 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 PRR12Q9ULL5 1215 aa12.27□□□□□ -0.45
LEMD3-202ENST00000539442 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 STXBP3O00186 592 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 IRF6O14896 467 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 NLRP5P59047 1200 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 KIF23Q02241 960 aaPredicted RBP12.26□□□□□ -0.45
LEMD3-202ENST00000539442 QRICH1Q2TAL8 776 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 MCTP1Q6DN14 999 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 OTUD7BQ6GQQ9 843 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 HEATR3Q7Z4Q2 680 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 BRAPQ7Z569 592 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 PRPF38AQ8NAV1 312 aaKnown RBP12.26□□□□□ -0.45
LEMD3-202ENST00000539442 DAGLBQ8NCG7 672 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
LEMD3-202ENST00000539442 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 SLF1Q9BQI6 1058 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 TANGO6Q9C0B7 1094 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 RANBP17Q9H2T7 1088 aaKnown RBP12.26□□□□□ -0.45
LEMD3-202ENST00000539442 FOXP1Q9H334 677 aaPredicted RBP12.26□□□□□ -0.45
LEMD3-202ENST00000539442 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
LEMD3-202ENST00000539442 GJB4Q9NTQ9 266 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 MYPNQ86TC9 1320 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 PASKQ96RG2 1323 aa12.26□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L15C9J2P7 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L13C9JLJ4 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L11C9JVI0 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L18D6R9N7 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L22D6RA61 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L17D6RBQ6 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L19D6RCP7 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L20D6RJB6 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.45
LEMD3-202ENST00000539442 KRT2P35908 639 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 NAPAP54920 295 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 USP17L24Q0WX57 530 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 FOXD4L5Q5VV16 416 aaPredicted RBP12.25□□□□□ -0.45
LEMD3-202ENST00000539442 CST9Q5W186 159 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 FERMT3Q86UX7 667 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
LEMD3-202ENST00000539442 FOXD4L4Q8WXT5 416 aaPredicted RBP12.25□□□□□ -0.45
LEMD3-202ENST00000539442 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 SHISA4Q96DD7 197 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 PPP1R9AQ9ULJ8 1098 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 KCNJ14Q9UNX9 436 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 MYH6P13533 1939 aa12.25□□□□□ -0.45
LEMD3-202ENST00000539442 LOC285556D6RIA3 1793 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 PPP1R11O60927 126 aaPredicted RBP12.24□□□□□ -0.45
LEMD3-202ENST00000539442 FLOT1O75955 427 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 TOMM70O94826 608 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 ZBTB48P10074 688 aaPredicted RBP12.24□□□□□ -0.45
LEMD3-202ENST00000539442 GNA11P29992 359 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 SNAPC2Q13487 334 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 DGKZQ13574 1117 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 GNL2Q13823 731 aaKnown RBP12.24□□□□□ -0.45
LEMD3-202ENST00000539442 NPY5RQ15761 445 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 ATL3Q6DD88 541 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 CATSPERGQ6ZRH7 1159 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 FASTKD5Q7L8L6 764 aaKnown RBP12.24□□□□□ -0.45
LEMD3-202ENST00000539442 FBXO11Q86XK2 927 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 BICD2Q8TD16 824 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 GLT8D2Q9H1C3 349 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 C6orf50Q9HD87 102 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 FBXO28Q9NVF7 368 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
LEMD3-202ENST00000539442 TRPM7Q96QT4 1865 aa12.23□□□□□ -0.45
LEMD3-202ENST00000539442 BAG4O95429 457 aaKnown RBP12.23□□□□□ -0.45
LEMD3-202ENST00000539442 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms