RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 FBXO40Q9UH90 709 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 DDX20Q9UHI6 824 aaKnown RBP18.4■□□□□ 0.54
CIT-210ENST00000539413 TNKSO95271 1327 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 DNAJC25-GNG10A0A024R161 153 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 NEFLP07196 543 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 TAL1P17542 331 aaPredicted RBP18.39■□□□□ 0.53
CIT-210ENST00000539413 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 PNMA1Q8ND90 353 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 TINF2Q9BSI4 451 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 ESYT1Q9BSJ8 1104 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 RANBP17Q9H2T7 1088 aaKnown RBP18.39■□□□□ 0.53
CIT-210ENST00000539413 KAT14Q9H8E8 782 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
CIT-210ENST00000539413 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
CIT-210ENST00000539413 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 ALAS1P13196 640 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 STOX1Q6ZVD7 989 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 NECAB2Q7Z6G3 386 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 DPF3Q92784 378 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 UBAC1Q9BSL1 405 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 HTATIP2Q9BUP3 242 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
CIT-210ENST00000539413 ZNFX1Q9P2E3 1918 aaKnown RBP18.38■□□□□ 0.53
CIT-210ENST00000539413 FRMPD3Q5JV73 1810 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 PLXNA1Q9UIW2 1896 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 E7EWF7 191 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 TRDNQ13061 729 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 TKFCQ3LXA3 575 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
CIT-210ENST00000539413 CCPG1Q9ULG6 757 aa18.37■□□□□ 0.53
CIT-210ENST00000539413 SEPT4O43236 478 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 MSCO60682 206 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 ICAM1P05362 532 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 SEC23AQ15436 765 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 GPATCH4Q5T3I0 446 aaKnown RBP18.36■□□□□ 0.53
CIT-210ENST00000539413 FGD4Q96M96 766 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 CPVLQ9H3G5 476 aa18.36■□□□□ 0.53
CIT-210ENST00000539413 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
CIT-210ENST00000539413 IFIT1BQ5T764 474 aaKnown RBP18.35■□□□□ 0.53
CIT-210ENST00000539413 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
CIT-210ENST00000539413 NCOA7Q8NI08 942 aa18.35■□□□□ 0.53
CIT-210ENST00000539413 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
CIT-210ENST00000539413 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
CIT-210ENST00000539413 PFASO15067 1338 aa18.34■□□□□ 0.53
CIT-210ENST00000539413 SNAI1O95863 264 aaPredicted RBP18.34■□□□□ 0.53
CIT-210ENST00000539413 CNTN2Q02246 1040 aa18.34■□□□□ 0.53
CIT-210ENST00000539413 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
CIT-210ENST00000539413 CHST3Q7LGC8 479 aa18.34■□□□□ 0.53
CIT-210ENST00000539413 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
CIT-210ENST00000539413 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
CIT-210ENST00000539413 ANO2Q9NQ90 1003 aa18.34■□□□□ 0.53
CIT-210ENST00000539413 NRBP1Q9UHY1 535 aa18.34■□□□□ 0.53
CIT-210ENST00000539413 SYNGAP1Q96PV0 1343 aa18.33■□□□□ 0.53
CIT-210ENST00000539413 H0YGN5 161 aa18.33■□□□□ 0.52
CIT-210ENST00000539413 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
CIT-210ENST00000539413 ZNF865P0CJ78 1059 aaPredicted RBP18.33■□□□□ 0.52
CIT-210ENST00000539413 COL6A1P12109 1028 aa18.33■□□□□ 0.52
CIT-210ENST00000539413 ASPRV1Q53RT3 343 aa18.33■□□□□ 0.52
CIT-210ENST00000539413 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.52
CIT-210ENST00000539413 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
CIT-210ENST00000539413 CDC45O75419 566 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 PARP1P09874 1014 aaKnown RBP18.32■□□□□ 0.52
CIT-210ENST00000539413 ANTXR2P58335 489 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 MB21D2Q8IYB1 491 aaPredicted RBP18.32■□□□□ 0.52
CIT-210ENST00000539413 SENP2Q9HC62 589 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.32■□□□□ 0.52
CIT-210ENST00000539413 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 CNPY2Q9Y2B0 182 aa18.32■□□□□ 0.52
CIT-210ENST00000539413 NFIBO00712 420 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 SLC27A2O14975 620 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 EVI5O60447 810 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 GJC2Q5T442 439 aaPredicted RBP18.31■□□□□ 0.52
CIT-210ENST00000539413 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 ADGRF4Q8IZF3 695 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 CLEC4DQ8WXI8 215 aa18.31■□□□□ 0.52
CIT-210ENST00000539413 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
CIT-210ENST00000539413 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
CIT-210ENST00000539413 ASTN1O14525 1302 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 WDR19Q8NEZ3 1342 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 ERICH2A1L162 156 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 DNM1LO00429 736 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 AKR1A1P14550 325 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 WTAPQ15007 396 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
CIT-210ENST00000539413 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 ARRDC4Q8NCT1 418 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
CIT-210ENST00000539413 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
CIT-210ENST00000539413 ALPK3Q96L96 1907 aa18.29■□□□□ 0.52
CIT-210ENST00000539413 DHX16O60231 1041 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms