RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 SLF1Q9BQI6 1058 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP30-210ENST00000539121 ABHD16BQ9H3Z7 469 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 MKNK2Q9HBH9 465 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 SPC25Q9HBM1 224 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 ZNF287Q9HBT7 754 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 STARD7Q9NQZ5 370 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 TMEM39AQ9NV64 488 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 SLC4A4Q9Y6R1 1079 aa7.48□□□□□ -1.21
USP30-210ENST00000539121 GREB1LQ9C091 1923 aaPredicted RBP7.47□□□□□ -1.21
USP30-210ENST00000539121 CYP2D7A0A087X1C5 515 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 SNAI1O95863 264 aaPredicted RBP7.47□□□□□ -1.21
USP30-210ENST00000539121 FOSL2P15408 326 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 TAL1P17542 331 aaPredicted RBP7.47□□□□□ -1.21
USP30-210ENST00000539121 GNAT2P19087 354 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 DNAJB2P25686 324 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 TIE1P35590 1138 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 CDK7P50613 346 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 OAZ1P54368 228 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 EPHB4P54760 987 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 NKX3-2P78367 333 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 ACVR2BQ13705 512 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 KCNA10Q16322 511 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 SLFNL1Q499Z3 407 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 SNRNP48Q6IEG0 339 aaKnown RBP7.47□□□□□ -1.21
USP30-210ENST00000539121 MFSD5Q6N075 450 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 CHST13Q8NET6 341 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 MYLIPQ8WY64 445 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 MKL1Q969V6 931 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 GLT1D1Q96MS3 346 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 STRBPQ96SI9 672 aaKnown RBP7.47□□□□□ -1.21
USP30-210ENST00000539121 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 PUS7LQ9H0K6 701 aaKnown RBP7.47□□□□□ -1.21
USP30-210ENST00000539121 SLC38A10Q9HBR0 1119 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 FBXO40Q9UH90 709 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 RCAN3Q9UKA8 241 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 TBX21Q9UL17 535 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 PCDHB8Q9UN66 801 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 SYNRGQ9UMZ2 1314 aa7.47□□□□□ -1.21
USP30-210ENST00000539121 BDP1A6H8Y1 2624 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 IGKV6D-41A0A0C4DH26 115 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 GSG1L2A8MUP6 293 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 SMIM22K7EJ46 135 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 RAD21O60216 631 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 ZBED4O75132 1171 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 NDUFB10O96000 172 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 ZFYP08048 801 aaPredicted RBP7.46□□□□□ -1.22
USP30-210ENST00000539121 RASA1P20936 1047 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 GJA9P57773 515 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 PPIGQ13427 754 aaKnown RBP eCLIP7.46□□□□□ -1.22
USP30-210ENST00000539121 AAMPQ13685 434 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 LRRFIP1Q32MZ4 808 aaKnown RBP7.46□□□□□ -1.22
USP30-210ENST00000539121 ZNF444Q8N0Y2 327 aaPredicted RBP7.46□□□□□ -1.22
USP30-210ENST00000539121 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 GMCL1P1Q8NEA9 526 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 SEZ6LQ9BYH1 1024 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 UPF3AQ9H1J1 476 aaKnown RBP7.46□□□□□ -1.22
USP30-210ENST00000539121 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.46□□□□□ -1.22
USP30-210ENST00000539121 FEM1BQ9UK73 627 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 RIPK3Q9Y572 518 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 CTDP1Q9Y5B0 961 aaPredicted RBP7.46□□□□□ -1.22
USP30-210ENST00000539121 MCM3APO60318 1980 aa7.46□□□□□ -1.22
USP30-210ENST00000539121 MYH4Q9Y623 1939 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 A0A0U1RQG5 324 aaPredicted RBP7.45□□□□□ -1.22
USP30-210ENST00000539121 ARVCFO00192 962 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 PLA2G6O60733 806 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 CABYRO75952 493 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 TTLL1O95922 423 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 CHGBP05060 677 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 ASGR1P07306 291 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 C6orf222P0C671 652 aaPredicted RBP7.45□□□□□ -1.22
USP30-210ENST00000539121 IRX6P78412 446 aaPredicted RBP7.45□□□□□ -1.22
USP30-210ENST00000539121 GRIN2CQ14957 1233 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 GNASQ5JWF2 1037 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 PPP4R3BQ5MIZ7 849 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 RASIP1Q5U651 963 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 CCDC129Q6ZRS4 1044 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 CPXCR1Q8N123 301 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 ANKRD35Q8N283 1001 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 TMEM199Q8N511 208 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 APPBP2Q92624 585 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 GPATCH3Q96I76 525 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 NUP88Q99567 741 aaPredicted RBP7.45□□□□□ -1.22
USP30-210ENST00000539121 ZNF576Q9H609 170 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 PRDM6Q9NQX0 595 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 ECHDC1Q9NTX5 307 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 MTMR4Q9NYA4 1195 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 CLIP2Q9UDT6 1046 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 ZHX1Q9UKY1 873 aaPredicted RBP7.45□□□□□ -1.22
USP30-210ENST00000539121 COG6Q9Y2V7 657 aa7.45□□□□□ -1.22
USP30-210ENST00000539121 MINDY4BA8MYZ0 360 aa7.44□□□□□ -1.22
USP30-210ENST00000539121 PATL2C9JE40 543 aaKnown RBP7.44□□□□□ -1.22
USP30-210ENST00000539121 TLR3O15455 904 aaKnown RBP7.44□□□□□ -1.22
USP30-210ENST00000539121 ATMINO43313 823 aaPredicted RBP7.44□□□□□ -1.22
USP30-210ENST00000539121 PDE4BQ07343 736 aa7.44□□□□□ -1.22
USP30-210ENST00000539121 TKFCQ3LXA3 575 aa7.44□□□□□ -1.22
USP30-210ENST00000539121 TJAP1Q5JTD0 557 aa7.44□□□□□ -1.22
USP30-210ENST00000539121 TMEM240Q5SV17 173 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms