RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 ZAP70P43403 619 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
KNTC1-210ENST00000539013 PCSK7Q16549 785 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 METTL24Q5JXM2 366 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 TMEM164Q5U3C3 297 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.75□□□□□ -1.33
KNTC1-210ENST00000539013 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
KNTC1-210ENST00000539013 RALYLQ86SE5 291 aaKnown RBP6.75□□□□□ -1.33
KNTC1-210ENST00000539013 FERMT3Q86UX7 667 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 NCOA7Q8NI08 942 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 FAM89AQ96GI7 184 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 DACT1Q9NYF0 836 aa6.75□□□□□ -1.33
KNTC1-210ENST00000539013 ITGB4P16144 1822 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 LAMA4Q16363 1823 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 CARMIL3Q8ND23 1372 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 RTL9Q8NET4 1388 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 C9orf172C9J069 976 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 ZNF213O14771 459 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 PRMT3O60678 531 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 PDE8BO95263 885 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 CTDNEP1O95476 244 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 FGAP02671 866 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 LIG1P18858 919 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 ADORA1P30542 326 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 APOBRQ0VD83 1088 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 TRDNQ13061 729 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 ALX1Q15699 326 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 PARP10Q53GL7 1025 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 SASS6Q6UVJ0 657 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 BRAPQ7Z569 592 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 MB21D2Q8IYB1 491 aaPredicted RBP6.74□□□□□ -1.33
KNTC1-210ENST00000539013 ZNF34Q8IZ26 560 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 VGLL2Q8N8G2 317 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 TDRD7Q8NHU6 1098 aaKnown RBP6.74□□□□□ -1.33
KNTC1-210ENST00000539013 BICD2Q8TD16 824 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 PIBF1Q8WXW3 757 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 LPIN2Q92539 896 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 CLP1Q92989 425 aaKnown RBP6.74□□□□□ -1.33
KNTC1-210ENST00000539013 PGBD1Q96JS3 809 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 GSX2Q9BZM3 304 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 UBE2OQ9C0C9 1292 aaKnown RBP6.74□□□□□ -1.33
KNTC1-210ENST00000539013 SEMA6BQ9H3T3 888 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 CNNM1Q9NRU3 951 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 TRMT112Q9UI30 125 aaKnown RBP6.74□□□□□ -1.33
KNTC1-210ENST00000539013 ZMIZ1Q9ULJ6 1067 aa6.74□□□□□ -1.33
KNTC1-210ENST00000539013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.74□□□□□ -1.33
KNTC1-210ENST00000539013 WNK3Q9BYP7 1800 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 ARAP2Q8WZ64 1704 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 A0A1W2PQ27 194 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 A0A1W2PQ64 194 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 A0A1W2PQD8 194 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 FOXP2O15409 715 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 GPAA1O43292 621 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 PRC1O43663 620 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CDKL5O76039 1030 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 YEATS4O95619 227 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CHGBP05060 677 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 SLC5A1P13866 664 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 FGFR2P21802 821 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CDC25BP30305 580 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 MCAMP43121 646 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CCINQ13939 588 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 PUM3Q15397 648 aaKnown RBP6.73□□□□□ -1.33
KNTC1-210ENST00000539013 HLFQ16534 295 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 FAM173BQ6P4H8 233 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CCDC73Q6ZRK6 1079 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 C8orf86Q6ZUL3 223 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 Q8N3U1 123 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 DDX11Q96FC9 970 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 TMEM87BQ96K49 555 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 PRIMPOLQ96LW4 560 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 PNMA5Q96PV4 448 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 MTA3Q9BTC8 594 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 GREM2Q9H772 168 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 RTEL1Q9NZ71 1219 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 ZBTB1Q9Y2K1 713 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 CCDC9Q9Y3X0 531 aaKnown RBP6.73□□□□□ -1.33
KNTC1-210ENST00000539013 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.73□□□□□ -1.33
KNTC1-210ENST00000539013 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 MYH3P11055 1940 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 RREB1Q92766 1687 aa6.73□□□□□ -1.33
KNTC1-210ENST00000539013 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
KNTC1-210ENST00000539013 COL16A1Q07092 1604 aaPredicted RBP6.72□□□□□ -1.33
KNTC1-210ENST00000539013 MYH7P12883 1935 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 CPLX1O14810 134 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 RRP9O43818 475 aaKnown RBP6.72□□□□□ -1.33
KNTC1-210ENST00000539013 KINO60870 393 aaKnown RBP6.72□□□□□ -1.33
KNTC1-210ENST00000539013 LGR5O75473 907 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 GNAT2P19087 354 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 ATP2B4P23634 1241 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 WEE1P30291 646 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 RCAN1P53805 252 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 EIF5P55010 431 aaKnown RBP6.72□□□□□ -1.33
KNTC1-210ENST00000539013 FAM160A1Q05DH4 1040 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 STX1AQ16623 288 aa6.72□□□□□ -1.33
KNTC1-210ENST00000539013 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
KNTC1-210ENST00000539013 ANO6Q4KMQ2 910 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms