RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SLC16A2P36021 539 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
CD9-208ENST00000538834 SLC35G1Q2M3R5 365 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 MAML3Q96JK9 1138 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 RNF208Q9H0X6 261 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 KIAA1217Q5T5P2 1943 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
CD9-208ENST00000538834 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
CD9-208ENST00000538834 MNX1P50219 401 aaPredicted RBP16.06■□□□□ 0.16
CD9-208ENST00000538834 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
CD9-208ENST00000538834 LHX8Q68G74 356 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
CD9-208ENST00000538834 CASC1Q6TDU7 716 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 MAMDC4Q6UXC1 1216 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 ZNF467Q7Z7K2 595 aaPredicted RBP16.06■□□□□ 0.16
CD9-208ENST00000538834 CPXCR1Q8N123 301 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 TRPV1Q8NER1 839 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 MMP19Q99542 508 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 MAP3K14Q99558 947 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.06■□□□□ 0.16
CD9-208ENST00000538834 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 GPCPD1Q9NPB8 672 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 FBXO40Q9UH90 709 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 MAD2L2Q9UI95 211 aa16.06■□□□□ 0.16
CD9-208ENST00000538834 CYBAP13498 195 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
CD9-208ENST00000538834 HSPA4P34932 840 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 LIFRP42702 1097 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 CCDC96Q2M329 555 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
CD9-208ENST00000538834 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
CD9-208ENST00000538834 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
CD9-208ENST00000538834 MAF1Q9H063 256 aa16.05■□□□□ 0.16
CD9-208ENST00000538834 HMX1Q9NP08 348 aaPredicted RBP16.05■□□□□ 0.16
CD9-208ENST00000538834 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
CD9-208ENST00000538834 IFIT3O14879 490 aaKnown RBP16.04■□□□□ 0.16
CD9-208ENST00000538834 GOLGA8HP0CJ92 632 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 MCM5P33992 734 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 SNAP25P60880 206 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 MLLT1Q03111 559 aaPredicted RBP16.04■□□□□ 0.16
CD9-208ENST00000538834 KCTD2Q14681 263 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 GRM4Q14833 912 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 MUM1L1Q5H9M0 696 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 SGMS1Q86VZ5 419 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 TMEM87BQ96K49 555 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
CD9-208ENST00000538834 GPHNQ9NQX3 736 aaPredicted RBP16.04■□□□□ 0.16
CD9-208ENST00000538834 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 BIN2Q9UBW5 565 aaPredicted RBP16.04■□□□□ 0.16
CD9-208ENST00000538834 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 PNMA2Q9UL42 364 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 OGDHLQ9ULD0 1010 aa16.04■□□□□ 0.16
CD9-208ENST00000538834 ASTN1O14525 1302 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 PRC1O43663 620 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 PGK2P07205 417 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
CD9-208ENST00000538834 CYP2C19P33261 490 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 WTAPQ15007 396 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 ADGRF4Q8IZF3 695 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 FBXL16Q8N461 479 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 TINF2Q9BSI4 451 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 UBA5Q9GZZ9 404 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 JMJD4Q9H9V9 463 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 CEP290O15078 2479 aa16.03■□□□□ 0.16
CD9-208ENST00000538834 CYTH3O43739 400 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 PARP1P09874 1014 aaKnown RBP16.02■□□□□ 0.16
CD9-208ENST00000538834 GHRHRQ02643 423 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.16
CD9-208ENST00000538834 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 TMTC2Q8N394 836 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 MORC4Q8TE76 937 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 DEFB118Q96PH6 123 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 NEK1Q96PY6 1258 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 USP26Q9BXU7 913 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 KATNBL1Q9H079 304 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 CWC22Q9HCG8 908 aaKnown RBP16.02■□□□□ 0.16
CD9-208ENST00000538834 CYP39A1Q9NYL5 469 aa16.02■□□□□ 0.16
CD9-208ENST00000538834 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
CD9-208ENST00000538834 KLRF2D3W0D1 207 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms