RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
SNHG1-209ENST00000538654 TNFRSF8P28908 595 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 AFMP43652 599 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 TNNI2P48788 182 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 UBXN1Q04323 297 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 PAK1Q13153 545 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 KCNJ12Q14500 433 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 CCDC170Q8IYT3 715 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 CAVIN3Q969G5 261 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 VPS16Q9H269 839 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
SNHG1-209ENST00000538654 RMND1Q9NWS8 449 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 PCDHB6Q9Y5E3 794 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 KIF1AQ12756 1690 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 DEXIO95424 95 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 MYBL2P10244 700 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 IDEP14735 1019 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 PRLRP16471 622 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 RXRAP19793 462 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 NF2P35240 595 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 SMTNP53814 917 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 PPP4CP60510 307 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 LRP10Q7Z4F1 713 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 NPAS4Q8IUM7 802 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 ZNF513Q8N8E2 541 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-209ENST00000538654 CHP1Q99653 195 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 PUS7LQ9H0K6 701 aaKnown RBP10.06□□□□□ -0.8
SNHG1-209ENST00000538654 EPN3Q9H201 632 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 LY9Q9HBG7 655 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 FAM217BQ9NTX9 383 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-209ENST00000538654 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 CAPN11Q9UMQ6 739 aa10.06□□□□□ -0.8
SNHG1-209ENST00000538654 ANKRD33BA6NCL7 494 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 TRIM75PA6NK02 468 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 ATP5J2-PTCD1G3V325 749 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
SNHG1-209ENST00000538654 CALRP27797 417 aaKnown RBP10.05□□□□□ -0.8
SNHG1-209ENST00000538654 CDR1P51861 262 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 HERVK_113P62684 666 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 PREPLQ4J6C6 727 aaPredicted RBP10.05□□□□□ -0.8
SNHG1-209ENST00000538654 EMC10Q5UCC4 262 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
SNHG1-209ENST00000538654 IRF2BPLQ9H1B7 796 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 JADE2Q9NQC1 790 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 TAB2Q9NYJ8 693 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 USTQ9Y2C2 406 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 ATRNO75882 1429 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 GOLGA6L7A0A1B0GV03 622 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 DCAF8L1A6NGE4 600 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 H7C1D1 291 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 ELF1P32519 619 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 PLEKHG6Q3KR16 790 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 RRAGBQ5VZM2 374 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 SMYD5Q6GMV2 418 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 KDM7AQ6ZMT4 941 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 GSPT2Q8IYD1 628 aaKnown RBP10.05□□□□□ -0.8
SNHG1-209ENST00000538654 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 VCPKMTQ9H867 229 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 MCM8Q9UJA3 840 aa10.05□□□□□ -0.8
SNHG1-209ENST00000538654 B4E1Z4 1266 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 RNF225M0QZC1 329 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 XBP1P17861 261 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 RCAN1P53805 252 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 NAP1L1P55209 391 aaKnown RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 MEA1Q16626 185 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 C1orf131Q8NDD1 294 aaKnown RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 TRIM58Q8NG06 486 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 JDP2Q8WYK2 163 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 CNNM2Q9H8M5 875 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 ACTR5Q9H9F9 607 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 KLC4Q9NSK0 619 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 CWC25Q9NXE8 425 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 FRMD4BQ9Y2L6 1034 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 COMMD10Q9Y6G5 202 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 TTC26A0AVF1 554 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 LGALS16A8MUM7 142 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 MYO1FO00160 1098 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 C7P10643 843 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 EEF1GP26641 437 aaKnown RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 CDC25AP30304 524 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 SATB1Q01826 763 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 ACTN3Q08043 901 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 C2orf54Q08AI8 447 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 KIF5AQ12840 1032 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 RTN1Q16799 776 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 LRRC24Q50LG9 513 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 GLE1Q53GS7 698 aaKnown RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 USP49Q70CQ1 688 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 ZNF467Q7Z7K2 595 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 TTC5Q8N0Z6 440 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 MB21D1Q8N884 522 aa10.04□□□□□ -0.8
SNHG1-209ENST00000538654 ZKSCAN4Q969J2 545 aaPredicted RBP10.04□□□□□ -0.8
SNHG1-209ENST00000538654 AIDAQ96BJ3 306 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms