RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 ALAS1P13196 640 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 AKR1A1P14550 325 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 PDE4AP27815 886 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 SLC16A2P36021 539 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 ADCYAP1R1P41586 468 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 NOVP48745 357 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 DCAF4Q8WV16 495 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 ACAD9Q9H845 621 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 RNF146Q9NTX7 359 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 ZNF536O15090 1300 aa16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 FRMPD2Q68DX3 1309 aaPredicted RBP16.85■□□□□ 0.29
RTN3P1-201ENST00000536295 PLA2G6O60733 806 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 SNAI1O95863 264 aaPredicted RBP16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 RTP1P59025 263 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 TTBK2Q6IQ55 1244 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 MSL3Q8N5Y2 521 aaKnown RBP16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 TRERF1Q96PN7 1200 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 RNF41Q9H4P4 317 aaPredicted RBP16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 TCP11L1Q9NUJ3 509 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 NEDD4P46934 1319 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 SYNGAP1Q96PV0 1343 aa16.84■□□□□ 0.29
RTN3P1-201ENST00000536295 A0A1W2PPC1 479 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 PCP11498 1178 aaKnown RBP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 RANBP2P49792 3224 aaKnown RBP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 MDM2Q00987 491 aaPredicted RBP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 MAMDC4Q6UXC1 1216 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 SLC39A5Q6ZMH5 540 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 ZNF467Q7Z7K2 595 aaPredicted RBP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 ESR2Q92731 530 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 FGD4Q96M96 766 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 A1CFQ9NQ94 594 aaKnown RBP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 CCPG1Q9ULG6 757 aa16.83■□□□□ 0.28
RTN3P1-201ENST00000536295 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 BMP8BP34820 402 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 TKFCQ3LXA3 575 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 ARMCX2Q7L311 632 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 RNF180Q86T96 592 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 UBE2OQ9C0C9 1292 aaKnown RBP16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 FAM184BQ9ULE4 1060 aa16.82■□□□□ 0.28
RTN3P1-201ENST00000536295 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 TRIM60Q495X7 471 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 CCDC144CPQ8IYA2 1237 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 DSCC1Q9BVC3 393 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 PRKAG2Q9UGJ0 569 aa16.81■□□□□ 0.28
RTN3P1-201ENST00000536295 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 SOX1O00570 391 aaPredicted RBP16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 KDM4AO75164 1064 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 ICAM1P05362 532 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 PDHBP11177 359 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 IMMTQ16891 758 aaKnown RBP16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 NSMFQ6X4W1 530 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 FAM133AQ8N9E0 248 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 TTC14Q96N46 770 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 LBHD1Q9BQE6 289 aaPredicted RBP16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 IL25Q9H293 177 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 RANBP17Q9H2T7 1088 aaKnown RBP16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 ABHD16BQ9H3Z7 469 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 PRDM5Q9NQX1 630 aaPredicted RBP16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 PHF24Q9UPV7 400 aa16.8■□□□□ 0.28
RTN3P1-201ENST00000536295 SOWAHBA6NEL2 793 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 B4E1Z4 1266 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 ADAMTS4O75173 837 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 BTNL9Q6UXG8 535 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 LRCH3Q96II8 777 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
RTN3P1-201ENST00000536295 DNAH12Q6ZR08 3092 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 LAMA4Q16363 1823 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 A0A1W2PQ45 241 aaPredicted RBP16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 A0A1W2PQY0 241 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 ADCY6O43306 1168 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 GOLGA8HP0CJ92 632 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 IRX5P78411 483 aaPredicted RBP16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 TDHQ8IZJ6 230 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 PURBQ96QR8 312 aaKnown RBP16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 CYP39A1Q9NYL5 469 aa16.78■□□□□ 0.28
RTN3P1-201ENST00000536295 MYADML2A6NDP7 307 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 ASB14A6NK59 587 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 DUSP11O75319 330 aaKnown RBP16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 ACLYP53396 1101 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 SNX17Q15036 470 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
RTN3P1-201ENST00000536295 PNMA1Q8ND90 353 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms