RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 MYH4Q9Y623 1939 aa15.99■□□□□ 0.15
UPK2-202ENST00000534788 CHD9Q3L8U1 2897 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 LRRC37A2A6NM11 1700 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 MBD4O95243 580 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 MRPS5P82675 430 aaKnown RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 CCDC85BQ15834 202 aaPredicted RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 GIMAP6Q6P9H5 292 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 PSRC1Q6PGN9 363 aaPredicted RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 TMEM199Q8N511 208 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 UHRF1Q96T88 793 aaPredicted RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 TEX13BQ9BXU2 312 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 UPF3AQ9H1J1 476 aaKnown RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 KANSL2Q9H9L4 492 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
UPK2-202ENST00000534788 TCF20Q9UGU0 1960 aaKnown RBP15.98■□□□□ 0.15
UPK2-202ENST00000534788 A0A0U1RQG5 324 aaPredicted RBP15.97■□□□□ 0.15
UPK2-202ENST00000534788 ARVCFO00192 962 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 PLA2G5P39877 138 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 TSHZ3Q63HK5 1081 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
UPK2-202ENST00000534788 ZNF467Q7Z7K2 595 aaPredicted RBP15.97■□□□□ 0.15
UPK2-202ENST00000534788 PCSK9Q8NBP7 692 aaKnown RBP15.97■□□□□ 0.15
UPK2-202ENST00000534788 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 FGD4Q96M96 766 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 FSD1Q9BTV5 496 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
UPK2-202ENST00000534788 CXXC1Q9P0U4 656 aaPredicted RBP15.97■□□□□ 0.15
UPK2-202ENST00000534788 REV3LO60673 3130 aa15.97■□□□□ 0.15
UPK2-202ENST00000534788 USP17L12C9JPN9 530 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 USP17L21D6R901 530 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 RAD21O60216 631 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 CD4P01730 458 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 IGFBP4P22692 258 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 GJA9P57773 515 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 ACVR2BQ13705 512 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 RAB30Q15771 203 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
UPK2-202ENST00000534788 HERVK_113Q902F9 699 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 NUP88Q99567 741 aaPredicted RBP15.96■□□□□ 0.15
UPK2-202ENST00000534788 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 NKX2-4Q9H2Z4 354 aa15.96■□□□□ 0.15
UPK2-202ENST00000534788 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.96■□□□□ 0.15
UPK2-202ENST00000534788 YBX2Q9Y2T7 364 aaKnown RBP15.96■□□□□ 0.15
UPK2-202ENST00000534788 CTAGE5O15320 804 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 CHGBP05060 677 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 CYP2C18P33260 490 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 CCDC144BQ3MJ40 725 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 VTI1AQ96AJ9 217 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
UPK2-202ENST00000534788 IL23AQ9NPF7 189 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 ARPP21Q9UBL0 812 aaPredicted RBP15.95■□□□□ 0.14
UPK2-202ENST00000534788 MSRAQ9UJ68 235 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 SLC4A4Q9Y6R1 1079 aa15.95■□□□□ 0.14
UPK2-202ENST00000534788 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 TLR3O15455 904 aaKnown RBP15.94■□□□□ 0.14
UPK2-202ENST00000534788 NKX3-2P78367 333 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 GNASQ5JWF2 1037 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.94■□□□□ 0.14
UPK2-202ENST00000534788 STRBPQ96SI9 672 aaKnown RBP15.94■□□□□ 0.14
UPK2-202ENST00000534788 KATNBL1Q9H079 304 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 ABHD16BQ9H3Z7 469 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 SLC28A3Q9HAS3 691 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 SPC25Q9HBM1 224 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 UMODL1Q5DID0 1318 aa15.94■□□□□ 0.14
UPK2-202ENST00000534788 CHD7Q9P2D1 2997 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 MYO9BQ13459 2157 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 XIRP2A4UGR9 3374 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 CTR9Q6PD62 1173 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 ARMCX2Q7L311 632 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 CPXCR1Q8N123 301 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 OSBP2Q969R2 916 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 FAM122AQ96E09 287 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 NECAB3Q96P71 396 aaPredicted RBP15.93■□□□□ 0.14
UPK2-202ENST00000534788 NACAP1Q9BZK3 213 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 ZNF287Q9HBT7 754 aa15.93■□□□□ 0.14
UPK2-202ENST00000534788 F5H6K3 240 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 GPAA1O43292 621 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 NDUFB10O96000 172 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 FGBP02675 491 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
UPK2-202ENST00000534788 BEX3Q00994 111 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 KLRC3Q07444 240 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 SBK1Q52WX2 424 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 OTOP2Q7RTS6 562 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 PRPF38AQ8NAV1 312 aaKnown RBP15.92■□□□□ 0.14
UPK2-202ENST00000534788 SLC43A3Q8NBI5 491 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 MTIF3Q9H2K0 278 aaKnown RBP15.92■□□□□ 0.14
UPK2-202ENST00000534788 HELLSQ9NRZ9 838 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 ASTN1O14525 1302 aa15.92■□□□□ 0.14
UPK2-202ENST00000534788 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms