RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
VPS11-205ENST00000534551 DDAH1O94760 285 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 PLEKHA8P1O95397 391 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 GNRH1P01148 92 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 ALAS1P13196 640 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 ADORA2AP29274 412 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 LIFRP42702 1097 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 TRIM32Q13049 653 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
VPS11-205ENST00000534551 CDC37Q16543 378 aaPredicted RBP16.36■□□□□ 0.21
VPS11-205ENST00000534551 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 MUM1L1Q5H9M0 696 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
VPS11-205ENST00000534551 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 TRIB2Q92519 343 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 USP6NLQ92738 828 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
VPS11-205ENST00000534551 VAT1LQ9HCJ6 419 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 CCPG1Q9ULG6 757 aa16.36■□□□□ 0.21
VPS11-205ENST00000534551 KLF18A0A0U1RQI7 1052 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 ATP2A1O14983 1001 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 CYTH3O43739 400 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 PGK2P07205 417 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 HOXD10P28358 340 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 APOBRQ0VD83 1088 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 USH1GQ495M9 461 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 PIBF1Q8WXW3 757 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 BRF1Q92994 677 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 MMP19Q99542 508 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 NUDT12Q9BQG2 462 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 MTA3Q9BTC8 594 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 JMJD4Q9H9V9 463 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 FLRT1Q9NZU1 646 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 IVNS1ABPQ9Y6Y0 642 aa16.35■□□□□ 0.21
VPS11-205ENST00000534551 ADCY3O60266 1144 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 PPP1R11O60927 126 aaPredicted RBP16.34■□□□□ 0.21
VPS11-205ENST00000534551 COBLO75128 1261 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 CAPN15O75808 1086 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 SLC25A27O95847 323 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 ICAM1P05362 532 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 OAZ1P54368 228 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 PRMT2P55345 433 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 QRICH1Q2TAL8 776 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 HOMER1Q86YM7 354 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 APBA2Q99767 749 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 MROH8Q9H579 483 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
VPS11-205ENST00000534551 SLC12A7Q9Y666 1083 aa16.34■□□□□ 0.21
VPS11-205ENST00000534551 SLC15A5A6NIM6 579 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 NFIBO00712 420 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 INHAP05111 366 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 HMGB1P09429 215 aaKnown RBP16.33■□□□□ 0.2
VPS11-205ENST00000534551 GRK4P32298 578 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 FGD1P98174 961 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 IRF5Q13568 498 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.2
VPS11-205ENST00000534551 MTFR1Q15390 333 aa16.33■□□□□ 0.2
VPS11-205ENST00000534551 MKI67P46013 3256 aaKnown RBP16.33■□□□□ 0.2
VPS11-205ENST00000534551 KIAA0100Q14667 2235 aaKnown RBP16.33■□□□□ 0.2
VPS11-205ENST00000534551 FCER1AP12319 257 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 PSMA5P28066 241 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 RGS2P41220 211 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
VPS11-205ENST00000534551 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 ZNF333Q96JL9 665 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 TRERF1Q96PN7 1200 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
VPS11-205ENST00000534551 PIGSQ96S52 555 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 ACAD9Q9H845 621 aa16.32■□□□□ 0.2
VPS11-205ENST00000534551 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
VPS11-205ENST00000534551 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
VPS11-205ENST00000534551 CNTNAP5Q8WYK1 1306 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 CCDC85CA6NKD9 419 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 GOLGA8AA7E2F4 631 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 ZBTB43O43298 467 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 FDX1P10109 184 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 CDC27P30260 824 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 SOX10P56693 466 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 SLC30A10Q6XR72 485 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 SRBD1Q8N5C6 995 aaKnown RBP16.31■□□□□ 0.2
VPS11-205ENST00000534551 CLEC4DQ8WXI8 215 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 FGD4Q96M96 766 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 CYP46A1Q9Y6A2 500 aa16.31■□□□□ 0.2
VPS11-205ENST00000534551 ASTN1O14525 1302 aa16.3■□□□□ 0.2
VPS11-205ENST00000534551 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms