RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 BRPF3Q9ULD4 1205 aa28.16■■■□□ 2.1
SIPA1-210ENST00000534406 IVNS1ABPQ9Y6Y0 642 aa28.16■■■□□ 2.1
SIPA1-210ENST00000534406 MYH6P13533 1939 aa28.16■■■□□ 2.1
SIPA1-210ENST00000534406 ZBTB43O43298 467 aa28.15■■■□□ 2.1
SIPA1-210ENST00000534406 RXRAP19793 462 aa28.15■■■□□ 2.1
SIPA1-210ENST00000534406 PRKCZQ05513 592 aa28.15■■■□□ 2.1
SIPA1-210ENST00000534406 ADGRF4Q8IZF3 695 aa28.15■■■□□ 2.1
SIPA1-210ENST00000534406 PDRG1Q9NUG6 133 aa28.15■■■□□ 2.1
SIPA1-210ENST00000534406 NAP1L2Q9ULW6 460 aaPredicted RBP28.15■■■□□ 2.1
SIPA1-210ENST00000534406 ZNF536O15090 1300 aa28.15■■■□□ 2.1
SIPA1-210ENST00000534406 GNAQP50148 359 aa28.14■■■□□ 2.1
SIPA1-210ENST00000534406 RCAN1P53805 252 aa28.14■■■□□ 2.1
SIPA1-210ENST00000534406 APOBRQ0VD83 1088 aa28.14■■■□□ 2.1
SIPA1-210ENST00000534406 CCDC144CPQ8IYA2 1237 aa28.14■■■□□ 2.1
SIPA1-210ENST00000534406 CCPG1Q9ULG6 757 aa28.14■■■□□ 2.1
SIPA1-210ENST00000534406 GOLGA8BA8MQT2 603 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 ICAM1P05362 532 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 SLC4A3P48751 1232 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 CDC37Q16543 378 aaPredicted RBP28.13■■■□□ 2.09
SIPA1-210ENST00000534406 FBXO46Q6PJ61 603 aaPredicted RBP28.13■■■□□ 2.09
SIPA1-210ENST00000534406 AGBL1Q96MI9 1066 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 PNMA2Q9UL42 364 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 PTPN22Q9Y2R2 807 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 RIPK3Q9Y572 518 aa28.13■■■□□ 2.09
SIPA1-210ENST00000534406 BAZ2BQ9UIF8 2168 aaKnown RBP28.13■■■□□ 2.09
SIPA1-210ENST00000534406 GOLGA8AA7E2F4 631 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 RBM25P49756 843 aaKnown RBP28.12■■■□□ 2.09
SIPA1-210ENST00000534406 TOB2Q14106 344 aaPredicted RBP28.12■■■□□ 2.09
SIPA1-210ENST00000534406 RTN1Q16799 776 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 TKFCQ3LXA3 575 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 FANCBQ8NB91 859 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 NUDT12Q9BQG2 462 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 LZTS2Q9BRK4 669 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 BACH2Q9BYV9 841 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 MCOLN1Q9GZU1 580 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 JMJD4Q9H9V9 463 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 GABRQQ9UN88 632 aa28.12■■■□□ 2.09
SIPA1-210ENST00000534406 SLC15A5A6NIM6 579 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 PTPREP23469 700 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 FLT3LGP49771 235 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 GRB14Q14449 540 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 RAET1EQ8TD07 263 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 VAT1LQ9HCJ6 419 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 HOMER2Q9NSB8 354 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 RBM28Q9NW13 759 aaKnown RBP28.11■■■□□ 2.09
SIPA1-210ENST00000534406 FBXO40Q9UH90 709 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 PTCH2Q9Y6C5 1203 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 NID2Q14112 1375 aa28.11■■■□□ 2.09
SIPA1-210ENST00000534406 STRNO43815 780 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 ALAS1P13196 640 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 MORN1Q5T089 497 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 ABRAQ8N0Z2 381 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 CHST13Q8NET6 341 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 SPZ1Q9BXG8 430 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 RIOX1Q9H6W3 641 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 RNF146Q9NTX7 359 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 GJD2Q9UKL4 321 aa28.1■■■□□ 2.09
SIPA1-210ENST00000534406 PLEKHA8P1O95397 391 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 FCER1AP12319 257 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 METAP2P50579 478 aaKnown RBP eCLIP28.09■■■□□ 2.09
SIPA1-210ENST00000534406 SLC35G1Q2M3R5 365 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 QRICH1Q2TAL8 776 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 TMTC3Q6ZXV5 915 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 NBPF11Q86T75 865 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 MTMR8Q96EF0 704 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 MMP19Q99542 508 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 ACAD9Q9H845 621 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 SMCHD1A6NHR9 2005 aa28.09■■■□□ 2.09
SIPA1-210ENST00000534406 CYTH3O43739 400 aa28.08■■■□□ 2.09
SIPA1-210ENST00000534406 TAL1P17542 331 aaPredicted RBP28.08■■■□□ 2.09
SIPA1-210ENST00000534406 RGS2P41220 211 aa28.08■■■□□ 2.09
SIPA1-210ENST00000534406 EVCP57679 992 aa28.08■■■□□ 2.09
SIPA1-210ENST00000534406 IRF5Q13568 498 aa28.08■■■□□ 2.09
SIPA1-210ENST00000534406 KCTD2Q14681 263 aa28.08■■■□□ 2.09
SIPA1-210ENST00000534406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.08■■■□□ 2.09
SIPA1-210ENST00000534406 HOMER1Q86YM7 354 aa28.08■■■□□ 2.09
SIPA1-210ENST00000534406 ZBTB5O15062 677 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 SMARCA1P28370 1054 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 ADORA2AP29274 412 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 MAP2K5Q13163 448 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 USP6NLQ92738 828 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 TRERF1Q96PN7 1200 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 APBA2Q99767 749 aa28.07■■■□□ 2.08
SIPA1-210ENST00000534406 ALDH8A1Q9H2A2 487 aaPredicted RBP28.07■■■□□ 2.08
SIPA1-210ENST00000534406 ZNFX1Q9P2E3 1918 aaKnown RBP28.06■■■□□ 2.08
SIPA1-210ENST00000534406 NEK4P51957 841 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 PPP2R5BQ15173 497 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 ANKRD1Q15327 319 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 USH1GQ495M9 461 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 FBXO11Q86XK2 927 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 SRBD1Q8N5C6 995 aaKnown RBP28.06■■■□□ 2.08
SIPA1-210ENST00000534406 TBC1D32Q96NH3 1257 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 HPS5Q9UPZ3 1129 aa28.06■■■□□ 2.08
SIPA1-210ENST00000534406 RBBP6Q7Z6E9 1792 aaKnown RBP28.06■■■□□ 2.08
SIPA1-210ENST00000534406 CCDC196A0A1B0GTZ2 297 aa28.05■■■□□ 2.08
SIPA1-210ENST00000534406 CYP2B6P20813 491 aa28.05■■■□□ 2.08
SIPA1-210ENST00000534406 SLAIN1Q8ND83 568 aa28.05■■■□□ 2.08
SIPA1-210ENST00000534406 RRP36Q96EU6 259 aaKnown RBP28.05■■■□□ 2.08
SIPA1-210ENST00000534406 PIGSQ96S52 555 aa28.05■■■□□ 2.08
SIPA1-210ENST00000534406 KIF2CQ99661 725 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms