RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 DTNBO60941 627 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 PLEKHA8P1O95397 391 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 CYP2C8P10632 490 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 PSMC4P43686 418 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 JAG1P78504 1218 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 NBR1Q14596 966 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 SKOR2Q2VWA4 1001 aaPredicted RBP11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 TREML2Q5T2D2 321 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 MCTP1Q6DN14 999 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 BRAPQ7Z569 592 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 SRBD1Q8N5C6 995 aaKnown RBP11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 FEZ1Q99689 392 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 ASCC2Q9H1I8 757 aaPredicted RBP11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 SRRDQ9UH36 339 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
LDLRAD3-206ENST00000534091 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 PDHBP11177 359 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 KRT85P78386 507 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 IRF5Q13568 498 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 TRIM29Q14134 588 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 PKN1Q16512 942 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 ASPRV1Q53RT3 343 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 KRT40Q6A162 431 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 LMBRD1Q9NUN5 540 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 TMX2Q9Y320 296 aa11.61□□□□□ -0.55
LDLRAD3-206ENST00000534091 ELP1O95163 1332 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 CAPN15O75808 1086 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 XBP1P17861 261 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 HERVK_113P62684 666 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 ICA1Q05084 483 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 SEPT2Q15019 361 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 CATSPERGQ6ZRH7 1159 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 COA7Q96BR5 231 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 AIFM3Q96NN9 605 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 HOXC10Q9NYD6 342 aa11.6□□□□□ -0.55
LDLRAD3-206ENST00000534091 TNPO2O14787 897 aaKnown RBP11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 PPFIA3O75145 1194 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 MMP1P03956 469 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 SCG2P13521 617 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 VCAM1P19320 739 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 MAPK4P31152 587 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 CCNA1P78396 465 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 SLC9C1Q4G0N8 1177 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 ANKRD13CQ8N6S4 541 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 MB21D1Q8N884 522 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 SCAND2PQ9GZW5 306 aaPredicted RBP11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 RIOX1Q9H6W3 641 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 SH3GLB2Q9NR46 395 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 CLIP2Q9UDT6 1046 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 CFAP45Q9UL16 551 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 RABGAP1Q9Y3P9 1069 aa11.59□□□□□ -0.55
LDLRAD3-206ENST00000534091 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 hCG_1984214I3L0E3 225 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 CYTH3O43739 400 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 TRAK2O60296 914 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 MBD3O95983 291 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 EEF2P13639 858 aaKnown RBP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 SAFBQ15424 915 aaKnown RBP eCLIP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 TRMT44Q8IYL2 757 aaKnown RBP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 ZNF713Q8N859 430 aaPredicted RBP11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 RAET1EQ8TD07 263 aa11.58□□□□□ -0.56
LDLRAD3-206ENST00000534091 ZNF333Q96JL9 665 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms