RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 ZNF365Q70YC5 407 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 ZNF444Q8N0Y2 327 aaPredicted RBP17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 TMEM199Q8N511 208 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 FGD4Q96M96 766 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 ABHD16BQ9H3Z7 469 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 MYH7P12883 1935 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 NDUFB10O96000 172 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 CST5P28325 142 aaPredicted RBP17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 GNASQ5JWF2 1037 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 GIMAP6Q6P9H5 292 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 KIFC2Q96AC6 838 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 STRBPQ96SI9 672 aaKnown RBP17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 GBF1Q92538 1859 aa17.09■□□□□ 0.33
SHARPIN-208ENST00000533948 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 ARVCFO00192 962 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 RASA1P20936 1047 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 CYP2C18P33260 490 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 FAM126BQ8IXS8 530 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 CHST13Q8NET6 341 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 ASB2Q96Q27 587 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 UPF3AQ9H1J1 476 aaKnown RBP17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 RAVER2Q9HCJ3 691 aaKnown RBP17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 CXXC1Q9P0U4 656 aaPredicted RBP17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 FEM1BQ9UK73 627 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 CHD7Q9P2D1 2997 aa17.08■□□□□ 0.32
SHARPIN-208ENST00000533948 NCOR1O75376 2440 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 UMODL1Q5DID0 1318 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 CTAGE5O15320 804 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 IGFBP4P22692 258 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 PTGS1P23219 599 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 GJA9P57773 515 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 ADAMTS19Q8TE59 1207 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 YBX2Q9Y2T7 364 aaKnown RBP17.07■□□□□ 0.32
SHARPIN-208ENST00000533948 GSG1L2A8MUP6 293 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 APPP05067 770 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 OAZ1P54368 228 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 BEX3Q00994 111 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 PSRC1Q6PGN9 363 aaPredicted RBP17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 ARMCX2Q7L311 632 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 MKL1Q969V6 931 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 ECHDC1Q9NTX5 307 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 MSRAQ9UJ68 235 aa17.06■□□□□ 0.32
SHARPIN-208ENST00000533948 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 FDX1P10109 184 aa17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 UHRF1Q96T88 793 aaPredicted RBP17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 KATNBL1Q9H079 304 aa17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 MTIF3Q9H2K0 278 aaKnown RBP17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 IL23AQ9NPF7 189 aa17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 SYNPO2Q9UMS6 1093 aa17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 DDX49Q9Y6V7 483 aaKnown RBP17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 REV3LO60673 3130 aa17.05■□□□□ 0.32
SHARPIN-208ENST00000533948 MYH4Q9Y623 1939 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 ASTN1O14525 1302 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 TTLL1O95922 423 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 CD4P01730 458 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 GNAT2P19087 354 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 TDO2P48775 406 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 MRPS5P82675 430 aaKnown RBP17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 TSHZ3Q63HK5 1081 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 CXCL17Q6UXB2 119 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 HERVK_113Q902F9 699 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 HOMER2Q9NSB8 354 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 MTMR4Q9NYA4 1195 aa17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 ISY1Q9ULR0 285 aaKnown RBP17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 TCF20Q9UGU0 1960 aaKnown RBP17.04■□□□□ 0.32
SHARPIN-208ENST00000533948 XIRP2A4UGR9 3374 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 IGKV6D-41A0A0C4DH26 115 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 ZEB2O60315 1214 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 CABYRO75952 493 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 FGBP02675 491 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 ZFYP08048 801 aaPredicted RBP17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 BMP3P12645 472 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 RABGGTBP53611 331 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 RAB30Q15771 203 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 LRRFIP1Q32MZ4 808 aaKnown RBP17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 SLFN13Q68D06 897 aa17.03■□□□□ 0.32
SHARPIN-208ENST00000533948 OTOP2Q7RTS6 562 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms