RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 DEFB118Q96PH6 123 aa18.52■□□□□ 0.56
TSKU-204ENST00000533752 RIPK3Q9Y572 518 aa18.52■□□□□ 0.56
TSKU-204ENST00000533752 TAF6LQ9Y6J9 622 aa18.52■□□□□ 0.56
TSKU-204ENST00000533752 ZNF536O15090 1300 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 COBLO75128 1261 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 REC8O95072 547 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 SGPL1O95470 568 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 MCM5P33992 734 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 SLC16A2P36021 539 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 CACNB2Q08289 660 aaPredicted RBP18.51■□□□□ 0.55
TSKU-204ENST00000533752 WTAPQ15007 396 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 CCDC174Q6PII3 467 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 ANKRD35Q8N283 1001 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 MAML3Q96JK9 1138 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 HOMER2Q9NSB8 354 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 RNF146Q9NTX7 359 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 FLRT1Q9NZU1 646 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 CCPG1Q9ULG6 757 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 BRCA2P51587 3418 aa18.51■□□□□ 0.55
TSKU-204ENST00000533752 PFASO15067 1338 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 WDR19Q8NEZ3 1342 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 ZNF792Q3KQV3 632 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 TMEM67Q5HYA8 995 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 MSL3Q8N5Y2 521 aaKnown RBP18.5■□□□□ 0.55
TSKU-204ENST00000533752 SHISA4Q96DD7 197 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 AGBL1Q96MI9 1066 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 NRBP1Q9UHY1 535 aa18.5■□□□□ 0.55
TSKU-204ENST00000533752 MSCO60682 206 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 IGHA2P01877 340 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 PGK2P07205 417 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 ALAS1P13196 640 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 KRT32Q14532 448 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 TMEM87BQ96K49 555 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 CRISPLD2Q9H0B8 497 aa18.49■□□□□ 0.55
TSKU-204ENST00000533752 DNAJC25-GNG10A0A024R161 153 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 PRC1O43663 620 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 TFRCP02786 760 aaKnown RBP18.48■□□□□ 0.55
TSKU-204ENST00000533752 GOLGA8HP0CJ92 632 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 CYP2C19P33261 490 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 ANTXR2P58335 489 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 CATIPQ7Z7H3 387 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 ZNF467Q7Z7K2 595 aaPredicted RBP18.48■□□□□ 0.55
TSKU-204ENST00000533752 TMTC2Q8N394 836 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 ANKLE1Q8NAG6 615 aa18.48■□□□□ 0.55
TSKU-204ENST00000533752 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
TSKU-204ENST00000533752 CYBAP13498 195 aa18.47■□□□□ 0.55
TSKU-204ENST00000533752 SNAP25P60880 206 aa18.47■□□□□ 0.55
TSKU-204ENST00000533752 TSGA10IPQ3SY00 556 aa18.47■□□□□ 0.55
TSKU-204ENST00000533752 TINF2Q9BSI4 451 aa18.47■□□□□ 0.55
TSKU-204ENST00000533752 SYNGAP1Q96PV0 1343 aa18.47■□□□□ 0.55
TSKU-204ENST00000533752 DHX16O60231 1041 aaKnown RBP18.46■□□□□ 0.55
TSKU-204ENST00000533752 DDAH1O94760 285 aa18.46■□□□□ 0.55
TSKU-204ENST00000533752 FARP2O94887 1054 aaPredicted RBP18.46■□□□□ 0.55
TSKU-204ENST00000533752 CCND3P30281 292 aaPredicted RBP18.46■□□□□ 0.55
TSKU-204ENST00000533752 GRM4Q14833 912 aa18.46■□□□□ 0.55
TSKU-204ENST00000533752 CHST3Q7LGC8 479 aa18.46■□□□□ 0.55
TSKU-204ENST00000533752 IGDCC4Q8TDY8 1250 aa18.46■□□□□ 0.55
TSKU-204ENST00000533752 LY9Q9HBG7 655 aa18.46■□□□□ 0.55
TSKU-204ENST00000533752 A1CFQ9NQ94 594 aaKnown RBP18.46■□□□□ 0.55
TSKU-204ENST00000533752 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
TSKU-204ENST00000533752 POTEB2H3BUK9 544 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 CNGA1P29973 690 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 LIFRP42702 1097 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 CDC37Q16543 378 aaPredicted RBP18.45■□□□□ 0.54
TSKU-204ENST00000533752 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 ADGRF4Q8IZF3 695 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 NEK1Q96PY6 1258 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 MAP3K14Q99558 947 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 UBA5Q9GZZ9 404 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 MAF1Q9H063 256 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 DDX20Q9UHI6 824 aaKnown RBP18.45■□□□□ 0.54
TSKU-204ENST00000533752 OGDHLQ9ULD0 1010 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 PLXNA1Q9UIW2 1896 aa18.45■□□□□ 0.54
TSKU-204ENST00000533752 ZNFX1Q9P2E3 1918 aaKnown RBP18.45■□□□□ 0.54
TSKU-204ENST00000533752 PALM3A6NDB9 673 aaPredicted RBP18.44■□□□□ 0.54
TSKU-204ENST00000533752 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
TSKU-204ENST00000533752 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
TSKU-204ENST00000533752 SH2B2O14492 632 aaPredicted RBP18.44■□□□□ 0.54
TSKU-204ENST00000533752 HMGB1P09429 215 aaKnown RBP18.44■□□□□ 0.54
TSKU-204ENST00000533752 KIF5BP33176 963 aa18.44■□□□□ 0.54
TSKU-204ENST00000533752 TROAPQ12815 778 aa18.44■□□□□ 0.54
TSKU-204ENST00000533752 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
TSKU-204ENST00000533752 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
TSKU-204ENST00000533752 SEPT4O43236 478 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 HSPA4P34932 840 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 TRAF1Q13077 416 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 MUM1L1Q5H9M0 696 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 NSMFQ6X4W1 530 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 UBE2Q1Q7Z7E8 422 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 ZNF654Q8IZM8 581 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 FAM133AQ8N9E0 248 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 CTCFLQ8NI51 663 aaPredicted RBP18.43■□□□□ 0.54
TSKU-204ENST00000533752 CPVLQ9H3G5 476 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 SENP2Q9HC62 589 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 CYP39A1Q9NYL5 469 aa18.43■□□□□ 0.54
TSKU-204ENST00000533752 ABCB11O95342 1321 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms