RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 HPS5Q9UPZ3 1129 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 IVNS1ABPQ9Y6Y0 642 aa13.98□□□□□ -0.17
SSBP3-214ENST00000533209 COL11A1P12107 1806 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-214ENST00000533209 ICAM1P05362 532 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 APOA5Q6Q788 366 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.176e-6■■■□□ 14.6
SSBP3-214ENST00000533209 NBPF11Q86T75 865 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 ABRAQ8N0Z2 381 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 FBXL16Q8N461 479 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 ABHD8Q96I13 439 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 JMJD4Q9H9V9 463 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 SLC12A7Q9Y666 1083 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
SSBP3-214ENST00000533209 ADCY3O60266 1144 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 CALM1P0DP23 149 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 CALM2P0DP24 149 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 CALM3P0DP25 149 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 FCER1AP12319 257 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
SSBP3-214ENST00000533209 RXRAP19793 462 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 CYP2B6P20813 491 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 ADORA2AP29274 412 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 GRK4P32298 578 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 MAP2K5Q13163 448 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 TKFCQ3LXA3 575 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 CHST13Q8NET6 341 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 BRF1Q92994 677 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 MTMR8Q96EF0 704 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.17
SSBP3-214ENST00000533209 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 VAT1LQ9HCJ6 419 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 HOMER2Q9NSB8 354 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 CCPG1Q9ULG6 757 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 DOCK3Q8IZD9 2030 aa13.96□□□□□ -0.17
SSBP3-214ENST00000533209 PLXNB2O15031 1838 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 CYTH3O43739 400 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
SSBP3-214ENST00000533209 COBLO75128 1261 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 HOXC6P09630 235 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 XRCC5P13010 732 aaKnown RBP13.95□□□□□ -0.18
SSBP3-214ENST00000533209 ALAS1P13196 640 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 ELNP15502 786 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 KIF5BP33176 963 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 RGS2P41220 211 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 FGD1P98174 961 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 APOBRQ0VD83 1088 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 TOB2Q14106 344 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-214ENST00000533209 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-214ENST00000533209 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 MUM1L1Q5H9M0 696 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 SYNE3Q6ZMZ3 975 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 MICU3Q86XE3 530 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 FANCBQ8NB91 859 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-214ENST00000533209 NPLOC4Q8TAT6 608 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 PXYLP1Q8TE99 480 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 TRERF1Q96PN7 1200 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 MMP19Q99542 508 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 APBA2Q99767 749 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
SSBP3-214ENST00000533209 PLEKHA8P1O95397 391 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 KCTD2Q14681 263 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 CCL14Q16627 93 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 TRIB2Q92519 343 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 PNMA2Q9UL42 364 aa13.94□□□□□ -0.18
SSBP3-214ENST00000533209 ZNF236Q9UL36 1845 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 DNAJC25-GNG10A0A024R161 153 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 ZBTB5O15062 677 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 ZBTB43O43298 467 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-214ENST00000533209 IGHA2P01877 340 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 PGK2P07205 417 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 GNAQP50148 359 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 RCAN1P53805 252 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 EVCP57679 992 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 ZNF792Q3KQV3 632 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 TMTC3Q6ZXV5 915 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 DPP9Q86TI2 863 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
SSBP3-214ENST00000533209 CLEC4DQ8WXI8 215 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 PIGSQ96S52 555 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 LZTS2Q9BRK4 669 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 A1CFQ9NQ94 594 aaKnown RBP13.93□□□□□ -0.18
SSBP3-214ENST00000533209 FAM217BQ9NTX9 383 aaPredicted RBP13.93□□□□□ -0.18
SSBP3-214ENST00000533209 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
SSBP3-214ENST00000533209 FLRT1Q9NZU1 646 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms