RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 COPB2P35606 906 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 IKQ13123 557 aaPredicted RBP21.03■□□□□ 0.96
SMG1-203ENST00000532700 LRRC41Q15345 812 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 GDF15Q99988 308 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 TCP11L1Q9NUJ3 509 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 PGK1P00558 417 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 MYCNP04198 464 aaPredicted RBP21.02■□□□□ 0.96
SMG1-203ENST00000532700 OAZ1P54368 228 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 CCDC96Q2M329 555 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 MFSD6Q6ZSS7 791 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 FAM160B2Q86V87 743 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 DDX11Q96FC9 970 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 PURBQ96QR8 312 aaKnown RBP21.02■□□□□ 0.96
SMG1-203ENST00000532700 GPCPD1Q9NPB8 672 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 RNF146Q9NTX7 359 aa21.02■□□□□ 0.96
SMG1-203ENST00000532700 PLA2G6O60733 806 aa21.01■□□□□ 0.95
SMG1-203ENST00000532700 TOP1P11387 765 aaKnown RBP21.01■□□□□ 0.95
SMG1-203ENST00000532700 PTGS1P23219 599 aa21.01■□□□□ 0.95
SMG1-203ENST00000532700 MAGEA10P43363 369 aaPredicted RBP21.01■□□□□ 0.95
SMG1-203ENST00000532700 MAMDC4Q6UXC1 1216 aa21.01■□□□□ 0.95
SMG1-203ENST00000532700 FERMT2Q96AC1 680 aa21.01■□□□□ 0.95
SMG1-203ENST00000532700 CPVLQ9H3G5 476 aa21.01■□□□□ 0.95
SMG1-203ENST00000532700 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
SMG1-203ENST00000532700 CTDP1Q9Y5B0 961 aaPredicted RBP21.01■□□□□ 0.95
SMG1-203ENST00000532700 TAF6LQ9Y6J9 622 aa21.01■□□□□ 0.95
SMG1-203ENST00000532700 MYADML2A6NDP7 307 aa21■□□□□ 0.95
SMG1-203ENST00000532700 SOWAHBA6NEL2 793 aa21■□□□□ 0.95
SMG1-203ENST00000532700 B4E1Z4 1266 aa21■□□□□ 0.95
SMG1-203ENST00000532700 KDM4AO75164 1064 aa21■□□□□ 0.95
SMG1-203ENST00000532700 PDHBP11177 359 aa21■□□□□ 0.95
SMG1-203ENST00000532700 ALAS1P13196 640 aa21■□□□□ 0.95
SMG1-203ENST00000532700 ANKRD35Q8N283 1001 aa21■□□□□ 0.95
SMG1-203ENST00000532700 CHST13Q8NET6 341 aa21■□□□□ 0.95
SMG1-203ENST00000532700 CHURC1Q8WUH1 139 aa21■□□□□ 0.95
SMG1-203ENST00000532700 DCAF4Q8WV16 495 aa21■□□□□ 0.95
SMG1-203ENST00000532700 KATNBL1Q9H079 304 aa21■□□□□ 0.95
SMG1-203ENST00000532700 ADCYAP1R1P41586 468 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 RTP1P59025 263 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 BTNL9Q6UXG8 535 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 FAM133AQ8N9E0 248 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 TRERF1Q96PN7 1200 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 DSCC1Q9BVC3 393 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 RANBP17Q9H2T7 1088 aaKnown RBP20.99■□□□□ 0.95
SMG1-203ENST00000532700 ACAD9Q9H845 621 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 XPNPEP3Q9NQH7 507 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.99■□□□□ 0.95
SMG1-203ENST00000532700 SYNGAP1Q96PV0 1343 aa20.99■□□□□ 0.95
SMG1-203ENST00000532700 ZNF213O14771 459 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 ADAMTS4O75173 837 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 GOLGA8HP0CJ92 632 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 SNHG28P0DPA3 235 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 MFAP1P55081 439 aaKnown RBP20.98■□□□□ 0.95
SMG1-203ENST00000532700 PTH1RQ03431 593 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 ARMCX2Q7L311 632 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 CCDC144CPQ8IYA2 1237 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 ZHX1Q9UKY1 873 aaPredicted RBP20.98■□□□□ 0.95
SMG1-203ENST00000532700 SYNRGQ9UMZ2 1314 aa20.98■□□□□ 0.95
SMG1-203ENST00000532700 CHMLP26374 656 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 ZNF543Q08ER8 600 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 PPP4R3BQ5MIZ7 849 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 TMEM63BQ5T3F8 832 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 SYDE2Q5VT97 1194 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 SLC39A5Q6ZMH5 540 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 ZNF467Q7Z7K2 595 aaPredicted RBP20.97■□□□□ 0.95
SMG1-203ENST00000532700 ARRDC4Q8NCT1 418 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 FBXO40Q9UH90 709 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 CCPG1Q9ULG6 757 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 LAMA3Q16787 3333 aa20.97■□□□□ 0.95
SMG1-203ENST00000532700 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.96■□□□□ 0.95
SMG1-203ENST00000532700 KBTBD13C9JR72 458 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 HIP1O00291 1037 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 NFIBO00712 420 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 ICAM1P05362 532 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 CENPBP07199 599 aaPredicted RBP20.96■□□□□ 0.95
SMG1-203ENST00000532700 RARBP10826 455 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 AKR1A1P14550 325 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 MDM2Q00987 491 aaPredicted RBP20.96■□□□□ 0.95
SMG1-203ENST00000532700 TRIM60Q495X7 471 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 ESR2Q92731 530 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 LRCH3Q96II8 777 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 ZSWIM5Q9P217 1185 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 PHF24Q9UPV7 400 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 CNPY2Q9Y2B0 182 aa20.96■□□□□ 0.95
SMG1-203ENST00000532700 FDX1P10109 184 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 ACVR2BQ13705 512 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 SNX17Q15036 470 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 CYB5R4Q7L1T6 521 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 SH3RF1Q7Z6J0 888 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 MSL3Q8N5Y2 521 aaKnown RBP20.95■□□□□ 0.94
SMG1-203ENST00000532700 ENAHQ8N8S7 591 aaPredicted RBP20.95■□□□□ 0.94
SMG1-203ENST00000532700 RNF41Q9H4P4 317 aaPredicted RBP20.95■□□□□ 0.94
SMG1-203ENST00000532700 CYP39A1Q9NYL5 469 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 ATP11BQ9Y2G3 1177 aa20.95■□□□□ 0.94
SMG1-203ENST00000532700 POTEB2H3BUK9 544 aa20.94■□□□□ 0.94
SMG1-203ENST00000532700 CTAGE5O15320 804 aa20.94■□□□□ 0.94
SMG1-203ENST00000532700 PCP11498 1178 aaKnown RBP20.94■□□□□ 0.94
SMG1-203ENST00000532700 CCDC144BQ3MJ40 725 aa20.94■□□□□ 0.94
SMG1-203ENST00000532700 CCSAPQ6IQ19 270 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms