RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
CTSB-225ENST00000532409 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
CTSB-225ENST00000532409 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
CTSB-225ENST00000532409 DNAJC25-GNG10A0A024R161 153 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 NEFLP07196 543 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 ALAS1P13196 640 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
CTSB-225ENST00000532409 MUM1L1Q5H9M0 696 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
CTSB-225ENST00000532409 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 CHST3Q7LGC8 479 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 DDX11Q96FC9 970 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 FGD4Q96M96 766 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 SENP2Q9HC62 589 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 SLC5A4Q9NY91 659 aa18.21■□□□□ 0.51
CTSB-225ENST00000532409 DDX20Q9UHI6 824 aaKnown RBP18.21■□□□□ 0.51
CTSB-225ENST00000532409 E7EWF7 191 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 FDX1P10109 184 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 ANKRD35Q8N283 1001 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 CHST13Q8NET6 341 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 UBA5Q9GZZ9 404 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 RANBP17Q9H2T7 1088 aaKnown RBP18.2■□□□□ 0.5
CTSB-225ENST00000532409 KAT14Q9H8E8 782 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 CCPG1Q9ULG6 757 aa18.2■□□□□ 0.5
CTSB-225ENST00000532409 ALPK3Q96L96 1907 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 MCM3APO60318 1980 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 CNTN2Q02246 1040 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 SEC23AQ15436 765 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 DPF3Q92784 378 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 TRERF1Q96PN7 1200 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 TINF2Q9BSI4 451 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
CTSB-225ENST00000532409 A1CFQ9NQ94 594 aaKnown RBP18.19■□□□□ 0.5
CTSB-225ENST00000532409 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
CTSB-225ENST00000532409 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
CTSB-225ENST00000532409 ICAM1P05362 532 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 TRDNQ13061 729 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 CCDC178Q5BJE1 867 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
CTSB-225ENST00000532409 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
CTSB-225ENST00000532409 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 LENG1Q96BZ8 264 aaPredicted RBP18.18■□□□□ 0.5
CTSB-225ENST00000532409 PURBQ96QR8 312 aaKnown RBP18.18■□□□□ 0.5
CTSB-225ENST00000532409 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 FBXO40Q9UH90 709 aa18.18■□□□□ 0.5
CTSB-225ENST00000532409 H0YGN5 161 aa18.17■□□□□ 0.5
CTSB-225ENST00000532409 SNAI1O95863 264 aaPredicted RBP18.17■□□□□ 0.5
CTSB-225ENST00000532409 NT5C2P49902 561 aa18.17■□□□□ 0.5
CTSB-225ENST00000532409 ANTXR2P58335 489 aa18.17■□□□□ 0.5
CTSB-225ENST00000532409 GPHNQ9NQX3 736 aaPredicted RBP18.17■□□□□ 0.5
CTSB-225ENST00000532409 PCDH10Q9P2E7 1040 aa18.17■□□□□ 0.5
CTSB-225ENST00000532409 ASTN1O14525 1302 aa18.17■□□□□ 0.5
CTSB-225ENST00000532409 PFASO15067 1338 aa18.17■□□□□ 0.5
CTSB-225ENST00000532409 LCTP09848 1927 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 SOWAHBA6NEL2 793 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 NFIBO00712 420 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 SEPT4O43236 478 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 ZNF865P0CJ78 1059 aaPredicted RBP18.16■□□□□ 0.5
CTSB-225ENST00000532409 RALYLQ86SE5 291 aaKnown RBP18.16■□□□□ 0.5
CTSB-225ENST00000532409 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
CTSB-225ENST00000532409 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 FAM133AQ8N9E0 248 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 HTATIP2Q9BUP3 242 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 C11orf49Q9H6J7 331 aa18.16■□□□□ 0.5
CTSB-225ENST00000532409 POTEB2H3BUK9 544 aa18.15■□□□□ 0.5
CTSB-225ENST00000532409 IFIT3O14879 490 aaKnown RBP18.15■□□□□ 0.5
CTSB-225ENST00000532409 SLC27A2O14975 620 aa18.15■□□□□ 0.5
CTSB-225ENST00000532409 CDC45O75419 566 aa18.15■□□□□ 0.5
CTSB-225ENST00000532409 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
CTSB-225ENST00000532409 TKFCQ3LXA3 575 aa18.15■□□□□ 0.5
CTSB-225ENST00000532409 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
CTSB-225ENST00000532409 GJC2Q5T442 439 aaPredicted RBP18.15■□□□□ 0.5
CTSB-225ENST00000532409 NSMFQ6X4W1 530 aa18.15■□□□□ 0.5
CTSB-225ENST00000532409 DNAH12Q6ZR08 3092 aa18.14■□□□□ 0.5
CTSB-225ENST00000532409 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
CTSB-225ENST00000532409 COL6A1P12109 1028 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 ASPRV1Q53RT3 343 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 CREB3L3Q68CJ9 461 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 MAMDC4Q6UXC1 1216 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 ADGRF4Q8IZF3 695 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 CLEC4DQ8WXI8 215 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 VAT1LQ9HCJ6 419 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 CYP39A1Q9NYL5 469 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 ZHX1Q9UKY1 873 aaPredicted RBP18.14■□□□□ 0.49
CTSB-225ENST00000532409 CNPY2Q9Y2B0 182 aa18.14■□□□□ 0.49
CTSB-225ENST00000532409 MSCO60682 206 aa18.13■□□□□ 0.49
CTSB-225ENST00000532409 CAPN2P17655 700 aa18.13■□□□□ 0.49
CTSB-225ENST00000532409 BAATQ14032 418 aaPredicted RBP18.13■□□□□ 0.49
CTSB-225ENST00000532409 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
CTSB-225ENST00000532409 CDC37Q16543 378 aaPredicted RBP18.13■□□□□ 0.49
CTSB-225ENST00000532409 USH1GQ495M9 461 aa18.13■□□□□ 0.49
CTSB-225ENST00000532409 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
CTSB-225ENST00000532409 SLC30A10Q6XR72 485 aa18.13■□□□□ 0.49
CTSB-225ENST00000532409 ARMCX2Q7L311 632 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms