RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 LINC00114Q6XXX2 140 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 SLCO4C1Q6ZQN7 724 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CHAMP1Q96JM3 812 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CRNKL1Q9BZJ0 848 aaKnown RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 LY9Q9HBG7 655 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 EPB41L4AQ9HCS5 686 aaPredicted RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 ATP8A2Q9NTI2 1148 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 DNAAF2Q9NVR5 837 aaKnown RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 NAP1L2Q9ULW6 460 aaPredicted RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 SLC12A7Q9Y666 1083 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 SLC4A4Q9Y6R1 1079 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 LAMB1P07942 1786 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 DLEC1Q9Y238 1755 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 UBR3Q6ZT12 1888 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 FAM177BA6PVY3 158 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 GOLGA8AA7E2F4 631 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 B4E1Z4 1266 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 IFIT3O14879 490 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 ORC4O43929 436 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 ZNF500O60304 480 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 BMP4P12644 408 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 XBP1P17861 261 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 U2AF2P26368 475 aaKnown RBP eCLIP6.43□□□□□ -1.385e-7■■■■□ 22.4
PCF11-205ENST00000530906 HIBADHP31937 336 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 IARSP41252 1262 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 PPARAQ07869 468 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 GRAPQ13588 217 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 DHX8Q14562 1220 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 WTAPQ15007 396 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 TLR1Q15399 786 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 SAFBQ15424 915 aaKnown RBP eCLIP6.43□□□□□ -1.38
PCF11-205ENST00000530906 SBK1Q52WX2 424 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 MEX3CQ5U5Q3 659 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 SASS6Q6UVJ0 657 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 NFXL1Q6ZNB6 911 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 FAM196AQ6ZSG2 479 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 ALYREFQ86V81 257 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 IQCA1Q86XH1 822 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 LCORLQ8N3X6 602 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 CNBD1Q8NA66 436 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 GRAPLQ8TC17 118 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 MRPS27Q92552 414 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 FAM84BQ96KN1 310 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 RIOK1Q9BRS2 568 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 UBAC1Q9BSL1 405 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 RNF26Q9BY78 433 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 ARMT1Q9H993 441 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 NCOA5Q9HCD5 579 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 RBM28Q9NW13 759 aaKnown RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 DACT1Q9NYF0 836 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 RAI14Q9P0K7 980 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 ARPP21Q9UBL0 812 aaPredicted RBP6.43□□□□□ -1.38
PCF11-205ENST00000530906 GGA1Q9UJY5 639 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 ZKSCAN5Q9Y2L8 839 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 NEDD4P46934 1319 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 XDHP47989 1333 aa6.43□□□□□ -1.38
PCF11-205ENST00000530906 COL1A1P02452 1464 aaPredicted RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 A0A0G2JLW4 131 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 PPP6R2O75170 966 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 DDAH1O94760 285 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 DEXIO95424 95 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 BMP15O95972 392 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 LDHCP07864 332 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 EPXP11678 715 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 LIG1P18858 919 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ATP4AP20648 1035 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ME1P48163 572 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 TERF1P54274 439 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ST5P78524 1137 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 TYRO3Q06418 890 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 STK38Q15208 465 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 SF3A1Q15459 793 aaKnown RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 NTRK3Q16288 839 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 STX1AQ16623 288 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 CRY2Q49AN0 593 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 XP32Q5T750 250 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 CYB5R4Q7L1T6 521 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ZNF804AQ7Z570 1209 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 RNF135Q8IUD6 432 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ELOA2Q8IYF1 753 aaPredicted RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 ZNF295-AS1Q8N0V1 137 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 LINC00301Q8NCQ3 95 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 CELF1Q92879 486 aaKnown RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 PGBD1Q96JS3 809 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 TIGD1Q96MW7 591 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 USP28Q96RU2 1077 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 MAP3K14Q99558 947 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ALG1Q9BT22 464 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 NAT10Q9H0A0 1025 aaKnown RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 FOXP1Q9H334 677 aaPredicted RBP6.42□□□□□ -1.38
PCF11-205ENST00000530906 SUV39H2Q9H5I1 410 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 RRAGCQ9HB90 399 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ZNF287Q9HBT7 754 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 ZSWIM5Q9P217 1185 aa6.42□□□□□ -1.38
PCF11-205ENST00000530906 TFIP11Q9UBB9 837 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms