RNA–Protein interactions for RNA: ENST00000530005.5

SLC43A3-217, Transcript of solute carrier family 43 member 3, humanhuman

TSL 1 (best)

Gene SLC43A3, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-217ENST00000530005 CYBAP13498 195 aa22.72■■□□□ 1.23
SLC43A3-217ENST00000530005 MNX1P50219 401 aaPredicted RBP22.72■■□□□ 1.23
SLC43A3-217ENST00000530005 SYDE2Q5VT97 1194 aa22.72■■□□□ 1.23
SLC43A3-217ENST00000530005 CHST13Q8NET6 341 aa22.72■■□□□ 1.23
SLC43A3-217ENST00000530005 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
SLC43A3-217ENST00000530005 FBXO40Q9UH90 709 aa22.71■■□□□ 1.23
SLC43A3-217ENST00000530005 SLC4A3P48751 1232 aa22.7■■□□□ 1.22
SLC43A3-217ENST00000530005 KIAA1211Q6ZU35 1233 aa22.7■■□□□ 1.22
SLC43A3-217ENST00000530005 FGD4Q96M96 766 aa22.7■■□□□ 1.22
SLC43A3-217ENST00000530005 UBAC1Q9BSL1 405 aa22.7■■□□□ 1.22
SLC43A3-217ENST00000530005 KAT14Q9H8E8 782 aa22.7■■□□□ 1.22
SLC43A3-217ENST00000530005 FRMPD3Q5JV73 1810 aa22.7■■□□□ 1.22
SLC43A3-217ENST00000530005 TRDNQ13061 729 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 NECTIN1Q15223 517 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 TKFCQ3LXA3 575 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 GPATCH4Q5T3I0 446 aaKnown RBP22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 ERICH6BQ5W0A0 696 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 CCDC174Q6PII3 467 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 ANKLE1Q8NAG6 615 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 HOMER2Q9NSB8 354 aa22.69■■□□□ 1.22
SLC43A3-217ENST00000530005 ICAM1P05362 532 aa22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 GOLGA8HP0CJ92 632 aa22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 MB21D2Q8IYB1 491 aaPredicted RBP22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 NCOA7Q8NI08 942 aa22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 DIS3LQ8TF46 1054 aaKnown RBP22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 ACAD9Q9H845 621 aa22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 RNF146Q9NTX7 359 aa22.68■■□□□ 1.22
SLC43A3-217ENST00000530005 CDC45O75419 566 aa22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 TAL1P17542 331 aaPredicted RBP22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 ANTXR2P58335 489 aa22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 DDX11Q96FC9 970 aa22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 TINF2Q9BSI4 451 aa22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 ANO2Q9NQ90 1003 aa22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 A1CFQ9NQ94 594 aaKnown RBP22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 DDX20Q9UHI6 824 aaKnown RBP22.67■■□□□ 1.22
SLC43A3-217ENST00000530005 SLC27A2O14975 620 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 ALAS1P13196 640 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 COL9A3Q14050 684 aaPredicted RBP22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 MUM1L1Q5H9M0 696 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 PRAMEF19Q5SWL8 479 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 MAMDC4Q6UXC1 1216 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 ANKRD35Q8N283 1001 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 SENP2Q9HC62 589 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 PPP4R2Q9NY27 417 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 NRBP1Q9UHY1 535 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 CCPG1Q9ULG6 757 aa22.66■■□□□ 1.22
SLC43A3-217ENST00000530005 ASPRV1Q53RT3 343 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 ZNF467Q7Z7K2 595 aaPredicted RBP22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 RALYLQ86SE5 291 aaKnown RBP22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 MSL3Q8N5Y2 521 aaKnown RBP22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 FAM133AQ8N9E0 248 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 PAWRQ96IZ0 340 aaKnown RBP22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 SEPT4O43236 478 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 MSCO60682 206 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 IGDCC4Q8TDY8 1250 aa22.65■■□□□ 1.22
SLC43A3-217ENST00000530005 IFIT3O14879 490 aaKnown RBP22.64■■□□□ 1.21
SLC43A3-217ENST00000530005 CNTN2Q02246 1040 aa22.64■■□□□ 1.21
SLC43A3-217ENST00000530005 PRPF38BQ5VTL8 546 aaKnown RBP22.64■■□□□ 1.21
SLC43A3-217ENST00000530005 WDR19Q8NEZ3 1342 aa22.64■■□□□ 1.21
SLC43A3-217ENST00000530005 SYNGAP1Q96PV0 1343 aa22.64■■□□□ 1.21
SLC43A3-217ENST00000530005 LCTP09848 1927 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 MCM3APO60318 1980 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 DNAH12Q6ZR08 3092 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 SNAI1O95863 264 aaPredicted RBP22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 ZNF865P0CJ78 1059 aaPredicted RBP22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 CNGA1P29973 690 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 STAG2Q8N3U4 1231 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 CYP39A1Q9NYL5 469 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 ASTN1O14525 1302 aa22.63■■□□□ 1.21
SLC43A3-217ENST00000530005 PARP1P09874 1014 aaKnown RBP22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 COL6A1P12109 1028 aa22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 CASC1Q6TDU7 716 aa22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 NECAB2Q7Z6G3 386 aa22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 ADGRF4Q8IZF3 695 aa22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 CLEC4DQ8WXI8 215 aa22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 PFASO15067 1338 aa22.62■■□□□ 1.21
SLC43A3-217ENST00000530005 ALPK3Q96L96 1907 aa22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 PALM3A6NDB9 673 aaPredicted RBP22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 SOWAHBA6NEL2 793 aa22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 NFIBO00712 420 aa22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 TROAPQ12815 778 aa22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 MAD2L2Q9UI95 211 aa22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 PNMA2Q9UL42 364 aa22.61■■□□□ 1.21
SLC43A3-217ENST00000530005 POTEB2H3BUK9 544 aa22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 WTAPQ15007 396 aa22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 SART3Q15020 963 aaKnown RBP22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 SLC35G1Q2M3R5 365 aa22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 MTA3Q9BTC8 594 aa22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 HTATIP2Q9BUP3 242 aa22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 LY9Q9HBG7 655 aa22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 GPHNQ9NQX3 736 aaPredicted RBP22.6■■□□□ 1.21
SLC43A3-217ENST00000530005 CEP290O15078 2479 aa22.59■■□□□ 1.21
SLC43A3-217ENST00000530005 ERICH2A1L162 156 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms