RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 SLC22A31A6NKX4 558 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 ATE1O95260 518 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 IGHA1P01876 353 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 ARID5AQ03989 594 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 ARSHQ5FYA8 562 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 TMEM201Q5SNT2 666 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 OVOS1Q6IE37 1185 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 TOP6BLQ8N6T0 577 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 KCT2Q8NC54 265 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 CPLX3Q8WVH0 158 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 GATA6Q92908 595 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 PRDM11Q9NQV5 511 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 DISP2A7MBM2 1401 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 COL14A1Q05707 1796 aaKnown RBP7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 PARD3Q8TEW0 1356 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 ALS2Q96Q42 1657 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 FAM86C2PA6NEL3 165 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 FAM170BA6NMN3 283 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 H2AFB1P0C5Y9 115 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 H2AFB2P0C5Z0 115 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 FSTP19883 344 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 NFIAQ12857 509 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 NBPF8Q3BBV2 869 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 RNF43Q68DV7 783 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 RUFY4Q6ZNE9 571 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 MCF2L2Q86YR7 1114 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 MRPL41Q8IXM3 137 aaKnown RBP7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 SPATA32Q96LK8 384 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 MIPEPQ99797 713 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 ZNRF3Q9ULT6 936 aa7.22□□□□□ -1.25
AMBRA1-209ENST00000529963 SPATA31A5Q5VU36 1347 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 SPATA31A7Q8IWB4 1347 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 LRIG2O94898 1065 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 CST3P01034 146 aaPredicted RBP7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 F13BP05160 661 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 POLR2BP30876 1174 aaKnown RBP7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 SLC6A19Q695T7 634 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 ZAR1Q86SH2 424 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 SLC43A3Q8NBI5 491 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 ANAPC16Q96DE5 110 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 SEC16BQ96JE7 1060 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 SRRTQ9BXP5 876 aaKnown RBP7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 NRAPQ86VF7 1730 aa7.21□□□□□ -1.26
AMBRA1-209ENST00000529963 WDR64B1ANS9 1081 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 SLITRK5O94991 958 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 ZNF765Q7L2R6 523 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 PHACTR4Q8IZ21 702 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 SHKBP1Q8TBC3 707 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 ATG4CQ96DT6 458 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 KIF2CQ99661 725 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 PRDM10Q9NQV6 1147 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 GMIPQ9P107 970 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 ATP7BP35670 1465 aa7.2□□□□□ -1.26
AMBRA1-209ENST00000529963 KIAA0232Q92628 1395 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 KCNQ2O43526 872 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 IGLV1-40P01703 118 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 SSBP05455 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 FGRP09769 529 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 YARSP54577 528 aaKnown RBP7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 EIF6P56537 245 aaKnown RBP7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 LSRQ86X29 649 aaPredicted RBP7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 BAHD1Q8TBE0 780 aaPredicted RBP7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 TMEM40Q8WWA1 233 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 SHDQ96IW2 340 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 CRBNQ96SW2 442 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 TANGO6Q9C0B7 1094 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 ITSN1Q15811 1721 aa7.19□□□□□ -1.26
AMBRA1-209ENST00000529963 SPATA31A1Q5TZJ5 1347 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 CNTNAP4Q9C0A0 1308 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 RAG1P15918 1043 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 CAP2P40123 477 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 PRSS36Q5K4E3 855 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 LETMD1Q6P1Q0 360 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 CDH24Q86UP0 819 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 FAM169BQ8N8A8 192 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 DBNDD2Q9BQY9 259 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 CDK19Q9BWU1 502 aa7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 ARHGEF28Q8N1W1 1705 aaKnown RBP7.18□□□□□ -1.26
AMBRA1-209ENST00000529963 CRYBG1Q9Y4K1 1723 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 IGSF3O75054 1194 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 ETFBP38117 255 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 EVA1CP58658 441 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 CHRNA2Q15822 529 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 OGFOD3Q6PK18 319 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 NLRC3Q7RTR2 1065 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 SLFN12Q8IYM2 578 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 MFSD2AQ8NA29 543 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 GMLQ99445 158 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 THSD7AQ9UPZ6 1657 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 POLR3AO14802 1390 aaPredicted RBP7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 ACEP12821 1306 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 MEIS3P2A8K0S8 358 aa7.17□□□□□ -1.26
AMBRA1-209ENST00000529963 EOMESO95936 686 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms