RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 CHST13Q8NET6 341 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 UBA5Q9GZZ9 404 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 RNF208Q9H0X6 261 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 CPVLQ9H3G5 476 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 LY9Q9HBG7 655 aa18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 ZNFX1Q9P2E3 1918 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 MKI67P46013 3256 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-218ENST00000529566 DNAJC25-GNG10A0A024R161 153 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 ICAM1P05362 532 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 PGK2P07205 417 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 HSPA4P34932 840 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 CACNB2Q08289 660 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 TROAPQ12815 778 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 KCTD2Q14681 263 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 WTAPQ15007 396 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 SART3Q15020 963 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 ZNF792Q3KQV3 632 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 ADCK5Q3MIX3 580 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 ASPRV1Q53RT3 343 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 STAG2Q8N3U4 1231 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
TSPAN4-218ENST00000529566 RPTORQ8N122 1335 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 ERICH2A1L162 156 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 PALM3A6NDB9 673 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 SH2B2O14492 632 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 REC8O95072 547 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 PARP1P09874 1014 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 PRKAR2AP13861 404 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 TAL1P17542 331 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 SLC4A3P48751 1232 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 EXOSC10Q01780 885 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 TKFCQ3LXA3 575 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 SHISA4Q96DD7 197 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 MAML3Q96JK9 1138 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 FBXO40Q9UH90 709 aa18.85■□□□□ 0.61
TSPAN4-218ENST00000529566 GJA8P48165 433 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 GRM4Q14833 912 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 SLC35G1Q2M3R5 365 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 ADGRF4Q8IZF3 695 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 TMEM87BQ96K49 555 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 TRERF1Q96PN7 1200 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 USP26Q9BXU7 913 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 HOMER2Q9NSB8 354 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 SLC5A4Q9NY91 659 aa18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 DIS3Q9Y2L1 958 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-218ENST00000529566 EPB41L2O43491 1005 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 ALAS1P13196 640 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 CYP2C19P33261 490 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 LIFRP42702 1097 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 MUM1L1Q5H9M0 696 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 MFSD14CQ5VZR4 134 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 TRPV1Q8NER1 839 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 FGD4Q96M96 766 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 CRISPLD2Q9H0B8 497 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 ACAD9Q9H845 621 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 JMJD4Q9H9V9 463 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 HMX1Q9NP08 348 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 CCPG1Q9ULG6 757 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 SNX14Q9Y5W7 946 aa18.83■□□□□ 0.6
TSPAN4-218ENST00000529566 WDR19Q8NEZ3 1342 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 KLRF2D3W0D1 207 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 SGPL1O95470 568 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 CCND3P30281 292 aaPredicted RBP18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 KRT32Q14532 448 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 DHX32Q7L7V1 743 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 TMTC2Q8N394 836 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 U2AF1L4Q8WU68 220 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 CLEC4DQ8WXI8 215 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 MTMR8Q96EF0 704 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 DEFB118Q96PH6 123 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 A1CFQ9NQ94 594 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-218ENST00000529566 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
TSPAN4-218ENST00000529566 ZNF654Q8IZM8 581 aa18.81■□□□□ 0.6
TSPAN4-218ENST00000529566 ANKRD35Q8N283 1001 aa18.81■□□□□ 0.6
TSPAN4-218ENST00000529566 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
TSPAN4-218ENST00000529566 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
TSPAN4-218ENST00000529566 DDAH1O94760 285 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 CYBAP13498 195 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 CDC37Q16543 378 aaPredicted RBP18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 LHX8Q68G74 356 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 MAMDC4Q6UXC1 1216 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 UBE2Q1Q7Z7E8 422 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 SGMS1Q86VZ5 419 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 FAM133AQ8N9E0 248 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 TINF2Q9BSI4 451 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 MYL10Q9BUA6 226 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 CYP39A1Q9NYL5 469 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 PNMA2Q9UL42 364 aa18.8■□□□□ 0.6
TSPAN4-218ENST00000529566 NFIBO00712 420 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 CYTH3O43739 400 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 CNTN2Q02246 1040 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 MLLT1Q03111 559 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 QRICH1Q2TAL8 776 aa18.79■□□□□ 0.6
TSPAN4-218ENST00000529566 PRAMEF19Q5SWL8 479 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms