RNA–Protein interactions for RNA: ENST00000529470.1

RSF1-207, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-207ENST00000529470 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
RSF1-207ENST00000529470 CASTP20810 708 aaKnown RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 MSX1P28360 303 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 VEGFBP49765 207 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 BECN1Q14457 450 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 TNIP1Q15025 636 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 GPR162Q16538 588 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 SLC4A8Q2Y0W8 1093 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 ADCK5Q3MIX3 580 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 HHIPL2Q6UWX4 724 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 NOL8Q76FK4 1167 aaKnown RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 MAPKAPK5Q8IW41 473 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 TEX11Q8IYF3 940 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 ZNF295-AS1Q8N0V1 137 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 FOXD4L4Q8WXT5 416 aaPredicted RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 IPO9Q96P70 1041 aaKnown RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 NEK1Q96PY6 1258 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 SAP130Q9H0E3 1048 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 SAP30BPQ9UHR5 308 aaKnown RBP6.88□□□□□ -1.31
RSF1-207ENST00000529470 DYRK1BQ9Y463 629 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 PCDHAC2Q9Y5I4 1007 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 CYP46A1Q9Y6A2 500 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 CHD4Q14839 1912 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 MYH13Q9UKX3 1938 aa6.88□□□□□ -1.31
RSF1-207ENST00000529470 DOCK2Q92608 1830 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 COL4A5P29400 1685 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 GAKO14976 1311 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 MYO3BQ8WXR4 1341 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 E7EWF7 191 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 H3BRB1 525 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 CYP2D6P10635 497 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 LMNB1P20700 586 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 PSMA5P28066 241 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 HDLBPQ00341 1268 aaKnown RBP6.87□□□□□ -1.31
RSF1-207ENST00000529470 KRT32Q14532 448 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 CFAP100Q494V2 611 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 ARSJQ5FYB0 599 aaPredicted RBP6.87□□□□□ -1.31
RSF1-207ENST00000529470 APOBEC3HQ6NTF7 200 aaKnown RBP6.87□□□□□ -1.31
RSF1-207ENST00000529470 CDC42EP5Q6NZY7 148 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 BLOC1S2Q6QNY1 142 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 STOX1Q6ZVD7 989 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 HSCBQ8IWL3 235 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 PHACTR1Q9C0D0 580 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
RSF1-207ENST00000529470 RUBCNLQ9H714 662 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 DCP1AQ9NPI6 582 aaPredicted RBP6.87□□□□□ -1.31
RSF1-207ENST00000529470 INCENPQ9NQS7 918 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 ATP8A2Q9NTI2 1148 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 PDRG1Q9NUG6 133 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 MCM9Q9NXL9 1143 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 BIN2Q9UBW5 565 aaPredicted RBP6.87□□□□□ -1.31
RSF1-207ENST00000529470 HDAC9Q9UKV0 1011 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 MYH7P12883 1935 aa6.87□□□□□ -1.31
RSF1-207ENST00000529470 RPAP1Q9BWH6 1393 aaPredicted RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 SHTN1A0MZ66 631 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 SMIM22K7EJ46 135 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 FZD9O00144 591 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 ICMTO60725 284 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 PPFIA3O75145 1194 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 F11P03951 625 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 POLR3DP05423 398 aaPredicted RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 RPS6KB1P23443 525 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 GMPSP49915 693 aaPredicted RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 CACNB3P54284 484 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 RHBDL3P58872 404 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 PPARAQ07869 468 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 PICALMQ13492 652 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 COL9A3Q14050 684 aaPredicted RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 DLGAP5Q15398 846 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 CTR9Q6PD62 1173 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 MFSD6Q6ZSS7 791 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 RUFY3Q7L099 469 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 CERS3Q8IU89 383 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 TBC1D10CQ8IV04 446 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 ALDH16A1Q8IZ83 802 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 PGBD3Q8N328 593 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 AGBL3Q8NEM8 1001 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 SNX21Q969T3 373 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 IL17RAQ96F46 866 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 PRMT6Q96LA8 375 aaPredicted RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 ZDHHC15Q96MV8 337 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 GMLQ99445 158 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 MRIQ9BWK5 157 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 TM6SF1Q9BZW5 370 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 TDRD3Q9H7E2 651 aaKnown RBP6.86□□□□□ -1.31
RSF1-207ENST00000529470 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 RNF181Q9P0P0 153 aa6.86□□□□□ -1.31
RSF1-207ENST00000529470 BRCA1P38398 1863 aaKnown RBP6.85□□□□□ -1.31
RSF1-207ENST00000529470 ZNF541Q9H0D2 1346 aa6.85□□□□□ -1.31
RSF1-207ENST00000529470 CDC14CA4D256 554 aa6.85□□□□□ -1.31
RSF1-207ENST00000529470 B4E1Z4 1266 aa6.85□□□□□ -1.31
RSF1-207ENST00000529470 SLC3A2P08195 630 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms