RNA–Protein interactions for RNA: ENST00000529470.1

RSF1-207, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-207ENST00000529470 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
RSF1-207ENST00000529470 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
RSF1-207ENST00000529470 PHF23Q9BUL5 403 aaPredicted RBP16.31■□□□□ 0.2
RSF1-207ENST00000529470 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
RSF1-207ENST00000529470 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
RSF1-207ENST00000529470 FOXD1Q16676 465 aa14.85□□□□□ -0.03
RSF1-207ENST00000529470 ADRA2BP18089 450 aa14.4□□□□□ -0.1
RSF1-207ENST00000529470 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
RSF1-207ENST00000529470 PIAS4Q8N2W9 510 aaPredicted RBP14.07□□□□□ -0.16
RSF1-207ENST00000529470 MSH5O43196 834 aa13.64□□□□□ -0.23
RSF1-207ENST00000529470 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
RSF1-207ENST00000529470 NISCHQ9Y2I1 1504 aa13.26□□□□□ -0.29
RSF1-207ENST00000529470 KCNA4P22459 653 aa13.17□□□□□ -0.3
RSF1-207ENST00000529470 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
RSF1-207ENST00000529470 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
RSF1-207ENST00000529470 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
RSF1-207ENST00000529470 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
RSF1-207ENST00000529470 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
RSF1-207ENST00000529470 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
RSF1-207ENST00000529470 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
RSF1-207ENST00000529470 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
RSF1-207ENST00000529470 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
RSF1-207ENST00000529470 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
RSF1-207ENST00000529470 DCAF8L1A6NGE4 600 aa12.35□□□□□ -0.43
RSF1-207ENST00000529470 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
RSF1-207ENST00000529470 POTEDQ86YR6 584 aa12.25□□□□□ -0.45
RSF1-207ENST00000529470 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
RSF1-207ENST00000529470 ZBTB22O15209 634 aa12.1□□□□□ -0.47
RSF1-207ENST00000529470 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
RSF1-207ENST00000529470 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
RSF1-207ENST00000529470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.482e-6■■■■□ 24.4
RSF1-207ENST00000529470 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
RSF1-207ENST00000529470 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
RSF1-207ENST00000529470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
RSF1-207ENST00000529470 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
RSF1-207ENST00000529470 RNF39Q9H2S5 420 aa11.69□□□□□ -0.54
RSF1-207ENST00000529470 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
RSF1-207ENST00000529470 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
RSF1-207ENST00000529470 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
RSF1-207ENST00000529470 APLP2Q06481 763 aa11.55□□□□□ -0.56
RSF1-207ENST00000529470 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
RSF1-207ENST00000529470 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
RSF1-207ENST00000529470 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
RSF1-207ENST00000529470 CAPN15O75808 1086 aa11.45□□□□□ -0.58
RSF1-207ENST00000529470 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
RSF1-207ENST00000529470 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
RSF1-207ENST00000529470 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
RSF1-207ENST00000529470 ABCB7O75027 752 aa11.26□□□□□ -0.61
RSF1-207ENST00000529470 POLA2Q14181 598 aa11.24□□□□□ -0.61
RSF1-207ENST00000529470 DSG3P32926 999 aa11.17□□□□□ -0.62
RSF1-207ENST00000529470 ABCC9O60706 1549 aa11.17□□□□□ -0.62
RSF1-207ENST00000529470 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
RSF1-207ENST00000529470 ZCCHC6Q5VYS8 1495 aaKnown RBP11.08□□□□□ -0.64
RSF1-207ENST00000529470 FBLN2P98095 1184 aa11.07□□□□□ -0.64
RSF1-207ENST00000529470 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
RSF1-207ENST00000529470 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
RSF1-207ENST00000529470 FKBP8Q14318 412 aa10.99□□□□□ -0.65
RSF1-207ENST00000529470 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
RSF1-207ENST00000529470 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
RSF1-207ENST00000529470 OSCARQ8IYS5 282 aa10.86□□□□□ -0.67
RSF1-207ENST00000529470 NACADO15069 1562 aa10.84□□□□□ -0.67
RSF1-207ENST00000529470 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
RSF1-207ENST00000529470 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
RSF1-207ENST00000529470 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
RSF1-207ENST00000529470 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
RSF1-207ENST00000529470 SPDYE2BA6NHP3 402 aa10.73□□□□□ -0.69
RSF1-207ENST00000529470 SPDYE6P0CI01 402 aa10.73□□□□□ -0.69
RSF1-207ENST00000529470 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
RSF1-207ENST00000529470 SCRIBQ14160 1630 aa10.69□□□□□ -0.7
RSF1-207ENST00000529470 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
RSF1-207ENST00000529470 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
RSF1-207ENST00000529470 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
RSF1-207ENST00000529470 PROM2Q8N271 834 aa10.6□□□□□ -0.71
RSF1-207ENST00000529470 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
RSF1-207ENST00000529470 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
RSF1-207ENST00000529470 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
RSF1-207ENST00000529470 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
RSF1-207ENST00000529470 BICRAQ9NZM4 1560 aa10.46□□□□□ -0.74
RSF1-207ENST00000529470 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
RSF1-207ENST00000529470 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
RSF1-207ENST00000529470 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
RSF1-207ENST00000529470 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
RSF1-207ENST00000529470 CLEC11AQ9Y240 323 aa10.42□□□□□ -0.74
RSF1-207ENST00000529470 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
RSF1-207ENST00000529470 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
RSF1-207ENST00000529470 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
RSF1-207ENST00000529470 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
RSF1-207ENST00000529470 MIER1Q8N108 512 aa10.32□□□□□ -0.76
RSF1-207ENST00000529470 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
RSF1-207ENST00000529470 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
RSF1-207ENST00000529470 RSF1Q96T23 1441 aaPredicted RBP10.26□□□□□ -0.77
RSF1-207ENST00000529470 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
RSF1-207ENST00000529470 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
RSF1-207ENST00000529470 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
RSF1-207ENST00000529470 MROH2BQ7Z745 1585 aa10.26□□□□□ -0.77
RSF1-207ENST00000529470 BAZ1AQ9NRL2 1556 aaPredicted RBP10.24□□□□□ -0.77
RSF1-207ENST00000529470 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
RSF1-207ENST00000529470 CHRDL2Q6WN34 429 aa10.18□□□□□ -0.78
RSF1-207ENST00000529470 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
RSF1-207ENST00000529470 EIF4G1Q04637 1599 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 635.1 ms