RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 LCTP09848 1927 aa10.09□□□□□ -0.79
CHD7-206ENST00000527900 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 TRIM43BA6NCK2 446 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 TSPY2A6NKD2 308 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 STAT2P52630 851 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 NKX3-2P78367 333 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 NUCB1Q02818 461 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 TRIM60Q495X7 471 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 BTNL9Q6UXG8 535 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 RASGRP2Q7LDG7 609 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 SH3RF1Q7Z6J0 888 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 FERMT2Q96AC1 680 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 TRIM43Q96BQ3 446 aaPredicted RBP10.08□□□□□ -0.8
CHD7-206ENST00000527900 LENG1Q96BZ8 264 aaPredicted RBP10.08□□□□□ -0.8
CHD7-206ENST00000527900 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 TSEN34Q9BSV6 310 aaKnown RBP10.08□□□□□ -0.8
CHD7-206ENST00000527900 PDLIM7Q9NR12 457 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 FBXO40Q9UH90 709 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 ATP11BQ9Y2G3 1177 aa10.08□□□□□ -0.8
CHD7-206ENST00000527900 ASTN1O14525 1302 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 CTAGE5O15320 804 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 DUSP11O75319 330 aaKnown RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 ITGB8P26012 769 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 SLC1A4P43007 532 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 IRX5P78411 483 aaPredicted RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 CNTN2Q02246 1040 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 NMIQ13287 307 aaPredicted RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 ACVR2BQ13705 512 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 TKFCQ3LXA3 575 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 KCTD1Q719H9 257 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 RNF180Q86T96 592 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 CHD1LQ86WJ1 897 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 ANKRD35Q8N283 1001 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 UPF3AQ9H1J1 476 aaKnown RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 ABHD16BQ9H3Z7 469 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 RWDD1Q9H446 243 aaPredicted RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 A1CFQ9NQ94 594 aaKnown RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
CHD7-206ENST00000527900 FAM184BQ9ULE4 1060 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 PRR12Q9ULL5 1215 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 STX8Q9UNK0 236 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 CNPY2Q9Y2B0 182 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 SYNRGQ9UMZ2 1314 aa10.07□□□□□ -0.8
CHD7-206ENST00000527900 A0A1W2PQ45 241 aaPredicted RBP10.06□□□□□ -0.8
CHD7-206ENST00000527900 A0A1W2PQY0 241 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 MYADML2A6NDP7 307 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 RANBP6O60518 1105 aaKnown RBP10.06□□□□□ -0.8
CHD7-206ENST00000527900 SDSP20132 328 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 CDK7P50613 346 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 ACLYP53396 1101 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 GJA9P57773 515 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 TLE2Q04725 743 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 CCDC144BQ3MJ40 725 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 TTBK2Q6IQ55 1244 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 ANKRD33Q7Z3H0 272 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 EXOC6Q8TAG9 804 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 DCAF4Q8WV16 495 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 TOX2Q96NM4 488 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
CHD7-206ENST00000527900 TMEM47Q9BQJ4 181 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 RANBP17Q9H2T7 1088 aaKnown RBP10.06□□□□□ -0.8
CHD7-206ENST00000527900 ACAD9Q9H845 621 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 MTMR10Q9NXD2 777 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 CCDC171Q6TFL3 1326 aa10.06□□□□□ -0.8
CHD7-206ENST00000527900 LRRC37A2A6NM11 1700 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 EYSQ5T1H1 3165 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 KIAA0355O15063 1070 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
CHD7-206ENST00000527900 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 TOP1P11387 765 aaKnown RBP10.05□□□□□ -0.8
CHD7-206ENST00000527900 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
CHD7-206ENST00000527900 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 SNAP25P60880 206 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 FAAP100Q0VG06 881 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 SHHQ15465 462 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 KCNA10Q16322 511 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 AKNAD1Q5T1N1 836 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 FAM109BQ6ICB4 259 aaPredicted RBP10.05□□□□□ -0.8
CHD7-206ENST00000527900 B4GALNT3Q6L9W6 998 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 Q7L0L9 218 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 DEFB123Q8N688 67 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 MORC4Q8TE76 937 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 BADQ92934 168 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 CHMP4CQ96CF2 233 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 TTC14Q96N46 770 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 TRERF1Q96PN7 1200 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 HOMER2Q9NSB8 354 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 RNF146Q9NTX7 359 aa10.05□□□□□ -0.8
CHD7-206ENST00000527900 CYP39A1Q9NYL5 469 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms