RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 HSPA5P11021 654 aaKnown RBP8.75□□□□□ -1.01
VPS26B-204ENST00000527586 GTF2F1P35269 517 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS26B-204ENST00000527586 NDUFV1P49821 464 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
VPS26B-204ENST00000527586 PLS1Q14651 629 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 ZNF792Q3KQV3 632 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 CCDC105Q8IYK2 499 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 KREMEN2Q8NCW0 462 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 FEZ1Q99689 392 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 SEZ6LQ9BYH1 1024 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 MBIPQ9NS73 344 aa8.75□□□□□ -1.01
VPS26B-204ENST00000527586 CTAGE5O15320 804 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 ADCY6O43306 1168 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 IQCF3P0C7M6 154 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 ARP10275 920 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 VCAM1P19320 739 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 BTDP43251 543 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 PSMC6P62333 389 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 LMNB2Q03252 620 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 DTWD2Q8NBA8 298 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 FLCNQ8NFG4 579 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 MSLNLQ96KJ4 702 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 MMP19Q99542 508 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 SIL1Q9H173 461 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 ALDH8A1Q9H2A2 487 aaPredicted RBP8.74□□□□□ -1.01
VPS26B-204ENST00000527586 RPAP3Q9H6T3 665 aaPredicted RBP8.74□□□□□ -1.01
VPS26B-204ENST00000527586 TRMT13Q9NUP7 481 aaKnown RBP8.74□□□□□ -1.01
VPS26B-204ENST00000527586 HERC5Q9UII4 1024 aaKnown RBP8.74□□□□□ -1.01
VPS26B-204ENST00000527586 ZBTB21Q9ULJ3 1066 aa8.74□□□□□ -1.01
VPS26B-204ENST00000527586 DIS3Q9Y2L1 958 aaKnown RBP8.74□□□□□ -1.01
VPS26B-204ENST00000527586 USP15Q9Y4E8 981 aaPredicted RBP8.74□□□□□ -1.01
VPS26B-204ENST00000527586 PI15O43692 258 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 SNAI1O95863 264 aaPredicted RBP8.73□□□□□ -1.01
VPS26B-204ENST00000527586 SUPT20HL2P0C7V6 817 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 KCNA4P22459 653 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 ZNF200P98182 395 aaPredicted RBP8.73□□□□□ -1.01
VPS26B-204ENST00000527586 ADAM15Q13444 863 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 UBALD2Q8IYN6 164 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
VPS26B-204ENST00000527586 SMRP1Q8NCR6 262 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 SAMD11Q96NU1 681 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 HNRNPABQ99729 332 aaKnown RBP8.73□□□□□ -1.01
VPS26B-204ENST00000527586 MROH5Q6ZUA9 1318 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 MYO7AQ13402 2215 aa8.73□□□□□ -1.01
VPS26B-204ENST00000527586 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
VPS26B-204ENST00000527586 NPM3O75607 178 aaKnown RBP8.72□□□□□ -1.01
VPS26B-204ENST00000527586 BRD1O95696 1058 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 PMLP29590 882 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 LMOD3Q0VAK6 560 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 MTMR3Q13615 1198 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 CWF19L1Q69YN2 538 aaKnown RBP8.72□□□□□ -1.01
VPS26B-204ENST00000527586 ZC3H14Q6PJT7 736 aaKnown RBP8.72□□□□□ -1.01
VPS26B-204ENST00000527586 MYH16Q9H6N6 1097 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 HOXC10Q9NYD6 342 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 NCDNQ9UBB6 729 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 INSL6Q9Y581 213 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 ATAD5Q96QE3 1844 aa8.72□□□□□ -1.01
VPS26B-204ENST00000527586 SIP14410 1827 aa8.71□□□□□ -1.01
VPS26B-204ENST00000527586 SMG1Q96Q15 3661 aaKnown RBP8.71□□□□□ -1.01
VPS26B-204ENST00000527586 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 C1QTNF9P0C862 333 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 AOC1P19801 751 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 USP14P54578 494 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 RHBDL3P58872 404 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 SHC2P98077 582 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 COASYQ13057 564 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 ACVR2BQ13705 512 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 COG2Q14746 738 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 SOWAHCQ53LP3 525 aaPredicted RBP8.71□□□□□ -1.02
VPS26B-204ENST00000527586 METTL24Q5JXM2 366 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 SUMF1Q8NBK3 374 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS26B-204ENST00000527586 RIN2Q8WYP3 895 aaPredicted RBP8.71□□□□□ -1.02
VPS26B-204ENST00000527586 PNNQ9H307 717 aaKnown RBP8.71□□□□□ -1.02
VPS26B-204ENST00000527586 SMOC2Q9H3U7 446 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 CLEC1BQ9P126 229 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 PI4KBQ9UBF8 816 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 SCN5AQ14524 2016 aa8.71□□□□□ -1.02
VPS26B-204ENST00000527586 IGF2RP11717 2491 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 PPP2R1AP30153 589 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 NKX3-2P78367 333 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 VARS2Q5ST30 1063 aaKnown RBP8.7□□□□□ -1.02
VPS26B-204ENST00000527586 TMEM192Q8IY95 271 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 ZGPATQ8N5A5 531 aaKnown RBP8.7□□□□□ -1.02
VPS26B-204ENST00000527586 MSL3Q8N5Y2 521 aaKnown RBP8.7□□□□□ -1.02
VPS26B-204ENST00000527586 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
VPS26B-204ENST00000527586 DNAJC18Q9H819 358 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 ANKFY1Q9P2R3 1169 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 SORCS3Q9UPU3 1222 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 CDK5RAP2Q96SN8 1893 aa8.7□□□□□ -1.02
VPS26B-204ENST00000527586 SRRM3A6NNA2 597 aaPredicted RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 PITPNM1O00562 1244 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 ZEB2O60315 1214 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 CSPG5O95196 566 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 PDE8BO95263 885 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 SLC25A27O95847 323 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms