RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 MARCH10Q8NA82 808 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 BAHD1Q8TBE0 780 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 PNISRQ8TF01 805 aaKnown RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 CHAC2Q8WUX2 184 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 NKD1Q969G9 470 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 ISL2Q96A47 359 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 WDR89Q96FK6 387 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 ALPK1Q96QP1 1244 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 CBX8Q9HC52 389 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 PRDM10Q9NQV6 1147 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 PRDM5Q9NQX1 630 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 CNOT6Q9ULM6 557 aaKnown RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 LAS1LQ9Y4W2 734 aaKnown RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 KDM2BQ8NHM5 1336 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 SCGB1D2O95969 90 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 LDHAP00338 332 aaKnown RBP4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 LMNB1P20700 586 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 ARNTP27540 789 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 STAT3P40763 770 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 EIF6P56537 245 aaKnown RBP4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 LMNB2Q03252 620 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 HDAC1Q13547 482 aaPredicted RBP4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 C21orf62-AS1Q17RA5 79 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 SKOR2Q2VWA4 1001 aaPredicted RBP4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 TM4SF20Q53R12 229 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 SYCP2LQ5T4T6 812 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 LLGL2Q6P1M3 1020 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 SLITRK4Q8IW52 837 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 SYNPOQ8N3V7 929 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 GOLM1Q8NBJ4 401 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 GRIN3AQ8TCU5 1115 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 MIR1-1HGQ9H1L0 117 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 ARNT2Q9HBZ2 717 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 ATP13A1Q9HD20 1204 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 PFDN2Q9UHV9 154 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 PCDHB5Q9Y5E4 795 aa4.99□□□□□ -1.61
CLNS1A-208ENST00000527265 WDHD1O75717 1129 aaPredicted RBP4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 KRT18P05783 430 aaKnown RBP4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 GSTP1P09211 210 aaKnown RBP4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 PMLP29590 882 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 GIPRP48546 466 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 NFKB2Q00653 900 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 DHX8Q14562 1220 aaKnown RBP4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 LRRC14Q15048 493 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 LARP1BQ659C4 914 aaKnown RBP4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 TMEM132EQ6IEE7 984 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 CLEC4GQ6UXB4 293 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 SPATC1Q76KD6 591 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 PDZD3Q86UT5 571 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 SAMD3Q8N6K7 520 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 MYLIPQ8WY64 445 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 MFSD3Q96ES6 412 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 EMILIN2Q9BXX0 1053 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 CHST12Q9NRB3 414 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 CYP8B1Q9UNU6 501 aa4.98□□□□□ -1.61
CLNS1A-208ENST00000527265 SHTN1A0MZ66 631 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 ZNF862O60290 1169 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 SEMA7AO75326 666 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 GJB6O95452 261 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 MYCLP1P12525 358 aaPredicted RBP4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 ATF3P18847 181 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 PDE6BP35913 854 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 MCL1Q07820 350 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 ZNF252P-AS1Q0IIN9 211 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 FOXD4Q12950 439 aaPredicted RBP4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 FXNQ16595 210 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 SEZ6Q53EL9 994 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 MAP1SQ66K74 1059 aaPredicted RBP4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 MPRIPQ6WCQ1 1025 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 BNC2Q6ZN30 1099 aaPredicted RBP4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 FAM214BQ7L5A3 538 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 TTC6Q86TZ1 520 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 NIM1KQ8IY84 436 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 RNF214Q8ND24 703 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 JARID2Q92833 1246 aaPredicted RBP4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 GAL3ST3Q96A11 431 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 CAAP1Q9H8G2 361 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 PICK1Q9NRD5 415 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 SLAMF8Q9P0V8 285 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 MCM8Q9UJA3 840 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 PCDHGC5Q9Y5F6 944 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 WASHC2CQ9Y4E1 1318 aa4.97□□□□□ -1.61
CLNS1A-208ENST00000527265 A0A087X0B3 334 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 B2RBV5 119 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 IRS4O14654 1257 aaPredicted RBP4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 SUV39H1O43463 412 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 F13A1P00488 732 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 MYL1P05976 194 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 NEFMP07197 916 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 SOX5P35711 763 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 KRTAP10-2P60368 255 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 DLG4P78352 724 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 SETQ01105 290 aaPredicted RBP4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 PTPN11Q06124 597 aaPredicted RBP4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 SSRP1Q08945 709 aaKnown RBP4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 BRD3Q15059 726 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 VPS72Q15906 364 aa4.96□□□□□ -1.62
CLNS1A-208ENST00000527265 CT47A1Q5JQC4 288 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms