RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RNF113AO15541 343 aaKnown RBP13.06□□□□□ -0.32
NEDD8-204ENST00000526430 KCNA10Q16322 511 aa13.06□□□□□ -0.32
NEDD8-204ENST00000526430 ACER1Q8TDN7 264 aa13.06□□□□□ -0.32
NEDD8-204ENST00000526430 SEC62Q99442 399 aaKnown RBP13.06□□□□□ -0.32
NEDD8-204ENST00000526430 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
NEDD8-204ENST00000526430 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEDD8-204ENST00000526430 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
NEDD8-204ENST00000526430 SIP14410 1827 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
NEDD8-204ENST00000526430 ARVCFO00192 962 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 CD4P01730 458 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 TAL1P17542 331 aaPredicted RBP13.05□□□□□ -0.32
NEDD8-204ENST00000526430 RABGGTBP53611 331 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 FOXK2Q01167 660 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 NCAPG2Q86XI2 1143 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 PCSK9Q8NBP7 692 aaKnown RBP13.05□□□□□ -0.32
NEDD8-204ENST00000526430 LENG1Q96BZ8 264 aaPredicted RBP13.05□□□□□ -0.32
NEDD8-204ENST00000526430 FBXL18Q96ME1 805 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 EHD4Q9H223 541 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 IL25Q9H293 177 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 CNPY2Q9Y2B0 182 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
NEDD8-204ENST00000526430 FOXP2O15409 715 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
NEDD8-204ENST00000526430 SLC25A27O95847 323 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 ALADP13716 330 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 MYOGP15173 224 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 CYP2C18P33260 490 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 ZNF792Q3KQV3 632 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
NEDD8-204ENST00000526430 OTOP2Q7RTS6 562 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
NEDD8-204ENST00000526430 MIGA1Q8NAN2 632 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
NEDD8-204ENST00000526430 M0R2C6 588 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 PRKAB2O43741 272 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 ASGR1P07306 291 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 ATP2A2P16615 1042 aaKnown RBP13.03□□□□□ -0.32
NEDD8-204ENST00000526430 DSG3P32926 999 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 ABCB5Q2M3G0 1257 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
NEDD8-204ENST00000526430 TICAM2Q86XR7 235 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 GJD3Q8N144 294 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 APPBP2Q92624 585 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
NEDD8-204ENST00000526430 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
NEDD8-204ENST00000526430 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 CA3P07451 260 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 ZFYP08048 801 aaPredicted RBP13.02□□□□□ -0.33
NEDD8-204ENST00000526430 NMIQ13287 307 aaPredicted RBP13.02□□□□□ -0.33
NEDD8-204ENST00000526430 PLS1Q14651 629 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 MMP19Q99542 508 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
NEDD8-204ENST00000526430 HIPK3Q9H422 1215 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
NEDD8-204ENST00000526430 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
NEDD8-204ENST00000526430 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 MYADML2A6NDP7 307 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 EPOPA6NHQ4 379 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 RFXAPO00287 272 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 ST18O60284 1047 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 PGK2P07205 417 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 CHMLP26374 656 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 GUCY1A2P33402 732 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 EVX2Q03828 476 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 KCTD2Q14681 263 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 KRT40Q6A162 431 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
NEDD8-204ENST00000526430 SLC43A3Q8NBI5 491 aa13.01□□□□□ -0.33
NEDD8-204ENST00000526430 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.01□□□□□ -0.33
NEDD8-204ENST00000526430 UMODL1Q5DID0 1318 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 MBD4O95243 580 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 PFKMP08237 780 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 C6orf222P0C671 652 aaPredicted RBP13□□□□□ -0.33
NEDD8-204ENST00000526430 GJA9P57773 515 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 NKX3-2P78367 333 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 MAMDC4Q6UXC1 1216 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
NEDD8-204ENST00000526430 CERS3Q8IU89 383 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 NOC4LQ9BVI4 516 aaKnown RBP13□□□□□ -0.33
NEDD8-204ENST00000526430 SEZ6LQ9BYH1 1024 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 SPC25Q9HBM1 224 aa13□□□□□ -0.33
NEDD8-204ENST00000526430 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms