RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
SSBP3-210ENST00000525990 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
SSBP3-210ENST00000525990 ASTN1O14525 1302 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 FRMPD2Q68DX3 1309 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-210ENST00000525990 KBTBD13C9JR72 458 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 CCDC96Q2M329 555 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 MUM1L1Q5H9M0 696 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 XPNPEP3Q9NQH7 507 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 PRR12Q9ULL5 1215 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 ATP11BQ9Y2G3 1177 aa14.25□□□□□ -0.13
SSBP3-210ENST00000525990 MYADML2A6NDP7 307 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 ALAS1P13196 640 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
SSBP3-210ENST00000525990 PTGS1P23219 599 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 OAZ1P54368 228 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 TRIM60Q495X7 471 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 SLC39A5Q6ZMH5 540 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■■□□ 18.9
SSBP3-210ENST00000525990 FAM160B2Q86V87 743 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 ARRDC4Q8NCT1 418 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 GPCPD1Q9NPB8 672 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 A1CFQ9NQ94 594 aaKnown RBP14.24□□□□□ -0.13
SSBP3-210ENST00000525990 RNF146Q9NTX7 359 aa14.24□□□□□ -0.13
SSBP3-210ENST00000525990 ZHX1Q9UKY1 873 aaPredicted RBP14.24□□□□□ -0.13
SSBP3-210ENST00000525990 SYNGAP1Q96PV0 1343 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 SYNRGQ9UMZ2 1314 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 LAMA3Q16787 3333 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 SOWAHBA6NEL2 793 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 ADAMTS4O75173 837 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 RARBP10826 455 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 BMP8BP34820 402 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 CHST13Q8NET6 341 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 CHURC1Q8WUH1 139 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 PURBQ96QR8 312 aaKnown RBP14.23□□□□□ -0.13
SSBP3-210ENST00000525990 ACAD9Q9H845 621 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-210ENST00000525990 NRBP1Q9UHY1 535 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
SSBP3-210ENST00000525990 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
SSBP3-210ENST00000525990 AKR1A1P14550 325 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 MFSD6Q6ZSS7 791 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 ARMCX2Q7L311 632 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 SH3RF1Q7Z6J0 888 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 CCDC144CPQ8IYA2 1237 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 DCAF4Q8WV16 495 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 TRERF1Q96PN7 1200 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 UBE2OQ9C0C9 1292 aaKnown RBP14.22□□□□□ -0.13
SSBP3-210ENST00000525990 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 CPVLQ9H3G5 476 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 FBXO40Q9UH90 709 aa14.22□□□□□ -0.13
SSBP3-210ENST00000525990 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-210ENST00000525990 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 PLA2G6O60733 806 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 PDHBP11177 359 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 ACVR2BQ13705 512 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 SNX17Q15036 470 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 CCDC144BQ3MJ40 725 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 TMEM63BQ5T3F8 832 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-210ENST00000525990 RANBP17Q9H2T7 1088 aaKnown RBP14.21□□□□□ -0.13
SSBP3-210ENST00000525990 PRDM5Q9NQX1 630 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-210ENST00000525990 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 CCPG1Q9ULG6 757 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 PHF24Q9UPV7 400 aa14.21□□□□□ -0.13
SSBP3-210ENST00000525990 A0A1W2PQ45 241 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-210ENST00000525990 A0A1W2PQY0 241 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 B4E1Z4 1266 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 POTEB2H3BUK9 544 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 NFIBO00712 420 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 ZNF213O14771 459 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 KDM4AO75164 1064 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 FDX1P10109 184 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 MFAP1P55081 439 aaKnown RBP14.2□□□□□ -0.14
SSBP3-210ENST00000525990 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 TTC22Q5TAA0 569 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 SYDE2Q5VT97 1194 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 BTNL9Q6UXG8 535 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 TDHQ8IZJ6 230 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 MSL3Q8N5Y2 521 aaKnown RBP14.2□□□□□ -0.14
SSBP3-210ENST00000525990 PDLIM7Q9NR12 457 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 FAM184BQ9ULE4 1060 aa14.2□□□□□ -0.14
SSBP3-210ENST00000525990 TRIM43BA6NCK2 446 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 ICAM1P05362 532 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 GOLGA8HP0CJ92 632 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 ITGB8P26012 769 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 TLE2Q04725 743 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 ZNF543Q08ER8 600 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 CCSAPQ6IQ19 270 aaPredicted RBP14.19□□□□□ -0.14
SSBP3-210ENST00000525990 NSMFQ6X4W1 530 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 RNF180Q86T96 592 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 KLHDC9Q8NEP7 349 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms