RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TCP10	Q12799	353 aa		12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	ORC2	Q13416	577 aa	Predicted RBP	12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	TMEM266	Q2M3C6	531 aa		12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	DACT2	Q5SW24	774 aa		12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	RTKN2	Q8IZC4	609 aa		12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	DDX4	Q9NQI0	724 aa	Known RBP	12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	IFNK	Q9P0W0	207 aa		12.2	□□□□□ -0.46
SPIDR-222	ENST00000524006	ESYT2	A0FGR8	921 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	PRR29	P0C7W0	189 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	PDHB	P11177	359 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	DSG3	P32926	999 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	UBA7	P41226	1012 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	GRIN1	Q05586	938 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	IK	Q13123	557 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	NPY5R	Q15761	445 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	INF2	Q27J81	1249 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	CFAP100	Q494V2	611 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	CERKL	Q49MI3	558 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	EARS2	Q5JPH6	523 aa	Known RBP	12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	DPY19L2	Q6NUT2	758 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	TMC6	Q7Z403	805 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	FILIP1	Q7Z7B0	1213 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	NEK8	Q86SG6	692 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	ANKRD20A12P	Q8NF67	263 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	RASGRP4	Q8TDF6	673 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	SHISA4	Q96DD7	197 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	PIGS	Q96S52	555 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	MRI	Q9BWK5	157 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	RAB34	Q9BZG1	259 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	ZMYND12	Q9H0C1	365 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	GLT8D2	Q9H1C3	349 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	TAOK3	Q9H2K8	898 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	PI4KB	Q9UBF8	816 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	PCDHA6	Q9UN73	950 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	PCDHA8	Q9Y5H6	950 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	LOXHD1	Q8IVV2	1947 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	FER1L6	Q2WGJ9	1857 aa		12.19	□□□□□ -0.46
SPIDR-222	ENST00000524006	GTPBP6	O43824	516 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	MARCH6	O60337	910 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	DDN	O94850	711 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	OR52Z1	P0C646	297 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	POTEI	P0CG38	1075 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	POTEJ	P0CG39	1038 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	HSPA1A	P0DMV8	641 aa	Known RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	HSPA1B	P0DMV9	641 aa	Known RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	SFPQ	P23246	707 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	SHMT1	P34896	483 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	PRPH	P41219	470 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	FANCC	Q00597	558 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	GABPA	Q06546	454 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	STIM1	Q13586	685 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	LETM2	Q2VYF4	491 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	LARGE2	Q8N3Y3	721 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	DCAF4	Q8WV16	495 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	C7orf43	Q8WVR3	580 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	EPSTI1	Q96J88	318 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	GSDMA	Q96QA5	445 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	NAP1L4	Q99733	375 aa	Known RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	XPO4	Q9C0E2	1151 aa	Known RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	MAGEF1	Q9HAY2	307 aa		12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.18	□□□□□ -0.46
SPIDR-222	ENST00000524006	CYTH3	O43739	400 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	CCNT1	O60563	726 aa	Known RBP	12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	ENTPD3	O75355	529 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	UBASH3A	P57075	661 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	ICA1	Q05084	483 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	ZNF543	Q08ER8	600 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	MORC3	Q14149	939 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	NOM1	Q5C9Z4	860 aa	Known RBP	12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	RBM26	Q5T8P6	1007 aa	Known RBP	12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	RRAGB	Q5VZM2	374 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	TMEM179	Q6ZVK1	233 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	NIM1K	Q8IY84	436 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	GRAMD1C	Q8IYS0	662 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	TNS4	Q8IZW8	715 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	OGFOD1	Q8N543	542 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	CUL5	Q93034	780 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	PAGE5	Q96GU1	130 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	CDK5RAP3	Q96JB5	506 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	AK8	Q96MA6	479 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	IDI2	Q9BXS1	227 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	UBA5	Q9GZZ9	404 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	KANSL2	Q9H9L4	492 aa		12.17	□□□□□ -0.46
SPIDR-222	ENST00000524006	IGKV6D-41	A0A0C4DH26	115 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	PNMA6F	A0A0J9YX94	578 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	FOXN1	O15353	648 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	CCP110	O43303	1012 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	ERCC5	P28715	1186 aa	Predicted RBP	12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	SLC1A4	P43007	532 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	TNNI2	P48788	182 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	MRPL12	P52815	198 aa	Known RBP	12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	CACNB3	P54284	484 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	NFIA	Q12857	509 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	ABCB5	Q2M3G0	1257 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	FILIP1L	Q4L180	1135 aa		12.16	□□□□□ -0.46
SPIDR-222	ENST00000524006	NT5DC1	Q5TFE4	455 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms