RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 UBA5Q9GZZ9 404 aa20.95■□□□□ 0.94
CLK4-211ENST00000522556 RANBP17Q9H2T7 1088 aaKnown RBP20.95■□□□□ 0.94
CLK4-211ENST00000522556 CTDP1Q9Y5B0 961 aaPredicted RBP20.95■□□□□ 0.94
CLK4-211ENST00000522556 MCM3APO60318 1980 aa20.95■□□□□ 0.94
CLK4-211ENST00000522556 TRDNQ13061 729 aa20.94■□□□□ 0.94
CLK4-211ENST00000522556 MUM1L1Q5H9M0 696 aa20.94■□□□□ 0.94
CLK4-211ENST00000522556 IFIT1BQ5T764 474 aaKnown RBP20.94■□□□□ 0.94
CLK4-211ENST00000522556 ABRAQ8N0Z2 381 aa20.94■□□□□ 0.94
CLK4-211ENST00000522556 MAML3Q96JK9 1138 aa20.94■□□□□ 0.94
CLK4-211ENST00000522556 FGD4Q96M96 766 aa20.94■□□□□ 0.94
CLK4-211ENST00000522556 RPTORQ8N122 1335 aa20.94■□□□□ 0.94
CLK4-211ENST00000522556 NT5C2P49902 561 aa20.93■□□□□ 0.94
CLK4-211ENST00000522556 OAZ1P54368 228 aa20.93■□□□□ 0.94
CLK4-211ENST00000522556 ZNF792Q3KQV3 632 aa20.93■□□□□ 0.94
CLK4-211ENST00000522556 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
CLK4-211ENST00000522556 STAG2Q8N3U4 1231 aa20.93■□□□□ 0.94
CLK4-211ENST00000522556 HMX1Q9NP08 348 aaPredicted RBP20.93■□□□□ 0.94
CLK4-211ENST00000522556 RNF146Q9NTX7 359 aa20.93■□□□□ 0.94
CLK4-211ENST00000522556 DNAJC25-GNG10A0A024R161 153 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 IFIT3O14879 490 aaKnown RBP20.92■□□□□ 0.94
CLK4-211ENST00000522556 SGPL1O95470 568 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 ALAS1P13196 640 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 KCTD2Q14681 263 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 SLC35G1Q2M3R5 365 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 CCDC178Q5BJE1 867 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 PRAMEF19Q5SWL8 479 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 TRMT44Q8IYL2 757 aaKnown RBP20.92■□□□□ 0.94
CLK4-211ENST00000522556 DDX49Q9Y6V7 483 aaKnown RBP20.92■□□□□ 0.94
CLK4-211ENST00000522556 MYH6P13533 1939 aa20.92■□□□□ 0.94
CLK4-211ENST00000522556 LRRC37A2A6NM11 1700 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 CYBAP13498 195 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 COPB2P35606 906 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 OLFML2BQ68BL8 750 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 CASC1Q6TDU7 716 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 IGDCC4Q8TDY8 1250 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 LRRC2Q9BYS8 371 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 CRISPLD2Q9H0B8 497 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 CCPG1Q9ULG6 757 aa20.91■□□□□ 0.94
CLK4-211ENST00000522556 PRC1O43663 620 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 ICAM1P05362 532 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 FDX1P10109 184 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 ADCK5Q3MIX3 580 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 TMEM67Q5HYA8 995 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 MFSD14CQ5VZR4 134 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.9■□□□□ 0.94
CLK4-211ENST00000522556 UBE2Q1Q7Z7E8 422 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 DIS3LQ8TF46 1054 aaKnown RBP20.9■□□□□ 0.94
CLK4-211ENST00000522556 TRERF1Q96PN7 1200 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 PURBQ96QR8 312 aaKnown RBP20.9■□□□□ 0.94
CLK4-211ENST00000522556 MYL10Q9BUA6 226 aa20.9■□□□□ 0.94
CLK4-211ENST00000522556 A1CFQ9NQ94 594 aaKnown RBP20.9■□□□□ 0.94
CLK4-211ENST00000522556 ASTN1O14525 1302 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 ALPK3Q96L96 1907 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 NFIBO00712 420 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 MNX1P50219 401 aaPredicted RBP20.89■□□□□ 0.93
CLK4-211ENST00000522556 CNTN2Q02246 1040 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 WTAPQ15007 396 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
CLK4-211ENST00000522556 ANO1Q5XXA6 986 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 CHST13Q8NET6 341 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 TCEANC2Q96MN5 208 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 ACAD9Q9H845 621 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 LY9Q9HBG7 655 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 MAD2L2Q9UI95 211 aa20.89■□□□□ 0.93
CLK4-211ENST00000522556 PARP1P09874 1014 aaKnown RBP20.88■□□□□ 0.93
CLK4-211ENST00000522556 ASPRV1Q53RT3 343 aa20.88■□□□□ 0.93
CLK4-211ENST00000522556 LHX8Q68G74 356 aa20.88■□□□□ 0.93
CLK4-211ENST00000522556 ADGRF4Q8IZF3 695 aa20.88■□□□□ 0.93
CLK4-211ENST00000522556 ANKRD35Q8N283 1001 aa20.88■□□□□ 0.93
CLK4-211ENST00000522556 DDX11Q96FC9 970 aa20.88■□□□□ 0.93
CLK4-211ENST00000522556 BAZ2BQ9UIF8 2168 aaKnown RBP20.87■□□□□ 0.93
CLK4-211ENST00000522556 SH2B2O14492 632 aaPredicted RBP20.87■□□□□ 0.93
CLK4-211ENST00000522556 FARP2O94887 1054 aaPredicted RBP20.87■□□□□ 0.93
CLK4-211ENST00000522556 TFRCP02786 760 aaKnown RBP20.87■□□□□ 0.93
CLK4-211ENST00000522556 GRM4Q14833 912 aa20.87■□□□□ 0.93
CLK4-211ENST00000522556 CDC37Q16543 378 aaPredicted RBP20.87■□□□□ 0.93
CLK4-211ENST00000522556 RAB11FIP4Q86YS3 637 aa20.87■□□□□ 0.93
CLK4-211ENST00000522556 CLEC4DQ8WXI8 215 aa20.87■□□□□ 0.93
CLK4-211ENST00000522556 FBXO40Q9UH90 709 aa20.87■□□□□ 0.93
CLK4-211ENST00000522556 CPA1P15085 419 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 CNGA1P29973 690 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 TROAPQ12815 778 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 USH1GQ495M9 461 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 NSMFQ6X4W1 530 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 LENG1Q96BZ8 264 aaPredicted RBP20.86■□□□□ 0.93
CLK4-211ENST00000522556 TINF2Q9BSI4 451 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 JMJD4Q9H9V9 463 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 VAT1LQ9HCJ6 419 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 SLC5A4Q9NY91 659 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 PDE4DIPQ5VU43 2346 aa20.86■□□□□ 0.93
CLK4-211ENST00000522556 ERICH2A1L162 156 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
CLK4-211ENST00000522556 SOWAHBA6NEL2 793 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 SNAI1O95863 264 aaPredicted RBP20.85■□□□□ 0.93
CLK4-211ENST00000522556 RXRAP19793 462 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 QRICH1Q2TAL8 776 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 TKFCQ3LXA3 575 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 SLC30A10Q6XR72 485 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 FAM133AQ8N9E0 248 aa20.85■□□□□ 0.93
CLK4-211ENST00000522556 CYP39A1Q9NYL5 469 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms