RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 LCTP09848 1927 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 GJA8P48165 433 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 WTAPQ15007 396 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 MMP19Q99542 508 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 ALDH8A1Q9H2A2 487 aaPredicted RBP11.06□□□□□ -0.64
CLK4-209ENST00000521621 RIOX1Q9H6W3 641 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 MSCO60682 206 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 INHAP05111 366 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 PARP1P09874 1014 aaKnown RBP11.06□□□□□ -0.64
CLK4-209ENST00000521621 ADORA2AP29274 412 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 EVCP57679 992 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 ANAPC15P60006 121 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 NKX3-2P78367 333 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 SNRNP48Q6IEG0 339 aaKnown RBP11.06□□□□□ -0.64
CLK4-209ENST00000521621 DHX32Q7L7V1 743 aaKnown RBP11.06□□□□□ -0.64
CLK4-209ENST00000521621 UBE2Q1Q7Z7E8 422 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 TRIB2Q92519 343 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 NEK1Q96PY6 1258 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 ACAD9Q9H845 621 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 MAD2L2Q9UI95 211 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 ABCB11O95342 1321 aa11.06□□□□□ -0.64
CLK4-209ENST00000521621 IFIT3O14879 490 aaKnown RBP11.05□□□□□ -0.64
CLK4-209ENST00000521621 CCL5P13501 91 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 GNAQP50148 359 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 KCTD2Q14681 263 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 KCTD1Q719H9 257 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 SPZ1Q9BXG8 430 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 PRC1O43663 620 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 SKAP1Q86WV1 359 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 MAML3Q96JK9 1138 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 USP26Q9BXU7 913 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 CTDP1Q9Y5B0 961 aaPredicted RBP11.05□□□□□ -0.64
CLK4-209ENST00000521621 PSMA5P28066 241 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 CATIPQ7Z7H3 387 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 FAM133AQ8N9E0 248 aa11.05□□□□□ -0.64
CLK4-209ENST00000521621 COBLO75128 1261 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 CYBAP13498 195 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 KIF5BP33176 963 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 NPLOC4Q8TAT6 608 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 ZKSCAN3Q9BRR0 538 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLK4-209ENST00000521621 CWC22Q9HCG8 908 aaKnown RBP11.04□□□□□ -0.64
CLK4-209ENST00000521621 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
CLK4-209ENST00000521621 DOCK3Q8IZD9 2030 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 CCDC85CA6NKD9 419 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 SGPL1O95470 568 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 SH3TC2Q8TF17 1288 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 RAVER2Q9HCJ3 691 aaKnown RBP11.04□□□□□ -0.64
CLK4-209ENST00000521621 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 RIPK3Q9Y572 518 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
CLK4-209ENST00000521621 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 CLEC4DQ8WXI8 215 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 JMJD4Q9H9V9 463 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
CLK4-209ENST00000521621 PEX10O60683 326 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 CACNB2Q08289 660 aaPredicted RBP11.03□□□□□ -0.64
CLK4-209ENST00000521621 DPP9Q86TI2 863 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 ADGRF4Q8IZF3 695 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 ZNF654Q8IZM8 581 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 FGD4Q96M96 766 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 RNF146Q9NTX7 359 aa11.03□□□□□ -0.64
CLK4-209ENST00000521621 hCG_1984214I3L0E3 225 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 CYP2B6P20813 491 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 PLS1Q14651 629 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 MCF2L2Q86YR7 1114 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 ZNF713Q8N859 430 aaPredicted RBP11.02□□□□□ -0.64
CLK4-209ENST00000521621 DNERQ8NFT8 737 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 SHISA4Q96DD7 197 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 TINF2Q9BSI4 451 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 CYP39A1Q9NYL5 469 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 CCPG1Q9ULG6 757 aa11.02□□□□□ -0.64
CLK4-209ENST00000521621 ASB14A6NK59 587 aa11.02□□□□□ -0.65
CLK4-209ENST00000521621 KLRF2D3W0D1 207 aa11.02□□□□□ -0.65
CLK4-209ENST00000521621 ZBTB5O15062 677 aa11.02□□□□□ -0.65
CLK4-209ENST00000521621 ELNP15502 786 aa11.02□□□□□ -0.65
CLK4-209ENST00000521621 FAM177A1Q8N128 213 aaPredicted RBP11.02□□□□□ -0.65
CLK4-209ENST00000521621 UNC93B1Q9H1C4 597 aa11.02□□□□□ -0.65
CLK4-209ENST00000521621 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
CLK4-209ENST00000521621 FRMPD2Q68DX3 1309 aaPredicted RBP11.02□□□□□ -0.65
CLK4-209ENST00000521621 RAD21O60216 631 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 MRPL11Q9Y3B7 192 aaKnown RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 PNMA6FA0A0J9YX94 578 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 RBM47A0AV96 593 aaKnown RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 CCDC69A6NI79 296 aa11.01□□□□□ -0.65
CLK4-209ENST00000521621 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
CLK4-209ENST00000521621 RPS6KB1P23443 525 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms