RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SMIM22K7EJ46 135 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 MAGEA1P43355 309 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 TRIM58Q8NG06 486 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 NCK2O43639 380 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 SF3A3Q12874 501 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 GBP6Q6ZN66 633 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 B4GALNT4Q76KP1 1039 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 CEP57Q86XR8 500 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 JPH2Q9BR39 696 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 RGPD2P0DJD1 1756 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 TSPY2A6NKD2 308 aa14.29□□□□□ -0.12
TRAPPC9-208ENST00000520857 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■■ 61.8
TRAPPC9-208ENST00000520857 STAG1Q8WVM7 1258 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 ARL8AQ96BM9 186 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 PPANQ9NQ55 473 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 PRPF6O94906 941 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 KRT14P02533 472 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 IGHMBP2P38935 993 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 NNTQ13423 1086 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 ENAHQ8N8S7 591 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 TCP11L1Q9NUJ3 509 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 GUCY2DQ02846 1103 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 ALX1Q15699 326 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 PTPROQ16827 1216 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 FAM114A1Q8IWE2 563 aa14.28□□□□□ -0.12
TRAPPC9-208ENST00000520857 MEGF6O75095 1541 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 GOLGA6L7A0A1B0GV03 622 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 RCCD1A6NED2 376 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 EIF3HO15372 352 aaKnown RBP eCLIP14.27□□□□□ -0.126e-7■■■□□ 15.4
TRAPPC9-208ENST00000520857 PLEKP08567 350 aaPredicted RBP14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 HNRNPH1P31943 449 aaKnown RBP14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 PMS1P54277 932 aaKnown RBP14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 HEATR3Q7Z4Q2 680 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 TSGA10Q9BZW7 698 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 CAPN11Q9UMQ6 739 aa14.27□□□□□ -0.12
TRAPPC9-208ENST00000520857 E7EVH7 732 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 MARCH6O60337 910 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 ZBED6P86452 979 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 SH3RF1Q7Z6J0 888 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 NUP58Q9BVL2 599 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 NLRC4Q9NPP4 1024 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 NFU1Q9UMS0 254 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 HYOU1Q9Y4L1 999 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 TACC3Q9Y6A5 838 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 MYO1FO00160 1098 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 EPHB4P54760 987 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 ATP2C1P98194 919 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 IFT88Q13099 833 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 PAPD7Q5XG87 772 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 NLRP10Q86W26 655 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.13
TRAPPC9-208ENST00000520857 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 NMT2O60551 498 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 SCG2P13521 617 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 GUCY1A3Q02108 690 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 KLHL7Q8IXQ5 586 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 CCDC114Q96M63 670 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 EPB41L5Q9HCM4 733 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 NFAT5O94916 1531 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 MYH15Q9Y2K3 1946 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 USP17L21D6R901 530 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 PDE8AO60658 829 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 EIF4A3P38919 411 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 RASSF7Q02833 373 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 INF2Q27J81 1249 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 STIM2Q9P246 746 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 TAF4BQ92750 862 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 CAPN6Q9Y6Q1 641 aa14.26□□□□□ -0.13
TRAPPC9-208ENST00000520857 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 BICDL2A1A5D9 508 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CALM1P0DP23 149 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CALM2P0DP24 149 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 CALM3P0DP25 149 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 TCP1P17987 556 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 WDR59Q6PJI9 974 aa14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 GIGYF2Q6Y7W6 1299 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-208ENST00000520857 IFT20Q8IY31 132 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms